Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3128 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCAGAAGCTGATTGAAAGGTTGAAGACTAATCTTTATGCTGTTCAGGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGAACTGGCTTGATAGTCTCAAAGATGCCATGTATGTTGCTGATGACTTGCTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTGGTTTCTCTCGTTTTCTCAATTTGCAAGATAGGGATGTAGCAAACAAGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATATATGTGGCAGGGAAGAAGACAAGGAGGCCATAGTAAAACTGTTGTTGGATGATAATGGTGATGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAAGATGGCAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTTCAAGTTTTTGCAGCTTGACGGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTGCGAAGATTGGGATAAACTTCTAAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCACCTTATGAACTAAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCAAAACATGCACGTCTCTCAACTGGTTTTATGGAGAATCCAACCTTGAAAAAAGTCGGCAGAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGTGGAAATTCTGATATCAAGTATTGGAATTATTTATTGAAGAGTGAGATCTGGGAACACTCCGATGATAAGATAAAGGTTGTTCCTGCTTTAAGAATCAGTTATTACTATCTTCCTTCATATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAGTTTAGCAAAGATGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGCAGGAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTGACTGCGAGATCATTTTTCCAACCTCATAAGATTCGTGAAAACAAGTTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATATTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAACGCAGTTGAGGTTGATATTAAAACTCGCCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGGGCTCAATTTGAATTCACAGATTCCATTTAACATGGAAAATGCACCTTGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAAATGCTTTCCTCTTGAGTCATTGCCTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATTTGTCTTACACCGACATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAAACATTGAAGCTGGTTGGATGTTGGAAACTAAAAGCCCTTCCTGTTGGCATGAAAGATCTTACAAATTTGCGTTACCTTGATATTAGCCTGACTCGTTTGCATGAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATGTTGTTGGGAAGCTTGATTCCCAAATTGAAAGAGATATACTTGAAGAGTTACGACCTCATAGTAATTTGAAACAACTACAAATTTGGGGTTACAGGGGTACAACATTTCCAGATTGGGTGGGACATTTTTCTTACCACAACATCACCCAAATAACACTGGGTGGTTTTTTTTCGGGTTATTTCAAGAATTGTTGTATGCTTCCTTCACTTGGACAGCTGCCCTCTTTGAAGCACCTGGAAATTTCAAAGTTTGAAAGGCTTCCTATTGTGGGTGCTGAGTTTTACCGAAATGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGAAACTCTTAGATTTCAGTCAATGCCTTGCTGGGAGGAATGGCGTTCATTGGAGTTCAATGCATTTCCTCGACTTAGGGAGCTTATCATAAGGAATTGTCCCATGTTGAGAGGAGATTTGCCAAATCAACTACCATCTTTGCGGTCACTTCGTATTGAGAATTGCGAGCAGCTCAGTTGTTGTGTTCCAAGAGGTCCTGCGATTACCTCTTTACGCATAGAAGGAAGCAATGAAGTGAGAATTGAGGAGCTACCTCCTTTGCTGGATAAGCTTTCAATTAATGGAAAGCATCAAGCGGAGTCGGTGATGGAGGCCATTACGCACACCCAACTCACTTGCCTCACATCTTTATCCATCTACAGCAAACAACTCAGCTGTGTAGCATCGCAGTTTCATGGGCTTACTCATCTTTGTATTGAAGGTGAATATGAGAGTGTGAAGTGTCTCCCAAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTATCTCAGACTGGATAGCATTAAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTATCTATTTATGAATGTTACAATTTGGAGAACATTGACGGAGAAAAGCTGCCTGCCTCTCTGACCCGCAGGTTTGGCCCAAAATTTCCCACATCCCCGCCATTCAAGTTGATTACAGATGGATTTGGTAATCCAACAACTTCAACAGGAATTCTGAGAAACAAGACAATGATAATAACTGCAACAGAGGAAGGTTCTTGA 3096 0.4076 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQKLIERLKTNLYAVQAFLIDAEQKQIKERAVKNWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFLSGFSRFLNLQDRDVANKMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDICGREEDKEAIVKLLLDDNGDDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDVFKVTKTIIEAITSSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESCEDWDKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLSTGFMENPTLKKVGRDLVKKCDGLPLAAQALGGLLRGNSDIKYWNYLLKSEIWEHSDDKIKVVPALRISYYYLPSYLKECFVYCSLYPKDYEFSKDELILLWMAENFLQPAGKKTPEEVGDEYFDELTARSFFQPHKIRENKFVMHDLVHDLAMIFAGEFYFRAEELENAVEVDIKTRHLSHNAKGNYPISKLLGVCDRVKHTRTFLGLNLNSQIPFNMENAPCILLSKLKYLRALSFKCFPLESLPDSIGELIHLRYLDLSYTDIMTLPDTLCNLYNLQTLKLVGCWKLKALPVGMKDLTNLRYLDISLTRLHEMPEGMSKLTSLQVLSNYVVGKLDSQIERDILEELRPHSNLKQLQIWGYRGTTFPDWVGHFSYHNITQITLGGFFSGYFKNCCMLPSLGQLPSLKHLEISKFERLPIVGAEFYRNDESCLETPFPMLETLRFQSMPCWEEWRSLEFNAFPRLRELIIRNCPMLRGDLPNQLPSLRSLRIENCEQLSCCVPRGPAITSLRIEGSNEVRIEELPPLLDKLSINGKHQAESVMEAITHTQLTCLTSLSIYSKQLSCVASQFHGLTHLCIEGEYESVKCLPKEGWLPATLEYLRLDSIKSVEMLECKGLAHLTSLQQLSIYECYNLENIDGEKLPASLTRRFGPKFPTSPPFKLITDGFGNPTTSTGILRNKTMIITATEEGS* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3128 1031 SUPERFAMILY L domain-like 482 845 - -
Amo10g3128 1031 PRINTS Disease resistance protein signature 821 837 - -
Amo10g3128 1031 PRINTS Disease resistance protein signature 189 204 - -
Amo10g3128 1031 PRINTS Disease resistance protein signature 359 373 - -
Amo10g3128 1031 PRINTS Disease resistance protein signature 262 276 - -
Amo10g3128 1031 Gene3D - 23 110 - -
Amo10g3128 1031 PANTHER DISEASE RESISTANCE PROTEIN RP 28 976 IPR044974 GO:0006952
Amo10g3128 1031 Pfam Rx N-terminal domain 6 94 IPR041118 -
Amo10g3128 1031 Pfam NB-ARC domain 185 388 IPR002182 GO:0043531
Amo10g3128 1031 SUPERFAMILY RNI-like 776 984 - -
Amo10g3128 1031 PANTHER OS05G0414200 PROTEIN 28 976 - -
Amo10g3128 1031 Gene3D Ribonuclease Inhibitor 846 990 IPR032675 -
Amo10g3128 1031 SMART LRR_typ_2 638 661 IPR003591 -
Amo10g3128 1031 SMART LRR_typ_2 591 614 IPR003591 -
Amo10g3128 1031 CDD RX-CC_like 37 127 IPR038005 -
Amo10g3128 1031 Gene3D - 407 492 IPR036388 -
Amo10g3128 1031 Gene3D - 322 406 IPR042197 -
Amo10g3128 1031 Gene3D - 143 316 IPR027417 -
Amo10g3128 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 422 IPR027417 -
Amo10g3128 1031 Gene3D Ribonuclease Inhibitor 518 845 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3128 Amo-Chr10 96899063 96902610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3128 186 656 WRKY Transcription Factor Family AT5G45050 22.242 3.27e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3128 - - ahf:112728733 1124.38