Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3125 ATGCCGACCGTGGCGGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTATTGAAGCAGCGTTTGCAGAATCGGATCCAAGACTCGCTTCAAGAATCCGACCCGTTCGGAGTCACGTCCAGGCCCGGCGAATCCGTCGCAGCCGCAAACCCATCCTTCTCCGACGGCGTCGCCACCAAGGACATTCACATTGACACCTTCACGTCCCTCTCCGTACGAATATTCCTACCCGAGTCAGCACTCGCCGAACCCGAACTTGCACGAGGTTCAAAGCCTCACCATCTCAAATCCATAACTGACTCTACAAACAAATTAGCTCAGGCAGGACCTGGATTAATCCGCGCCGAAAAGGCGTCGCTCGCGTCGCGGCGAGCGGGGGCGACGCCGAGGGAGGAGCCTCGACGGAACAGCCTCGGCCCTACGGGAGAGGGATTGAGCTCCGCATCCGGTGGCGGAGGGTACCTTGGATACTCGCCGGCGCCGGGAGGCCGCCGGAGAAAGCTGCCGGTGATTGTGCAGTTTCATGGAGGAGGTTGGGTGAGCGGGAGTAGTGACTCGGTGGCGAATGATTTGTTCTGCCGGCGGATCGCAAAGCTGTGCGACGCGATTGTTGTGGCGGTGAGTTACCGGCTGGCGCCGGAGAACCAGTATCCGGCTGCATTCGAGGACGGGTTCAAGGTTCTGAATTGGCTGGCGAAGCAGGCGAATTTGGCGGAGTGTAGCAGGTCCATGGAGGTTAGGAAGTTGGATGCTCACAAGGCTATTGTTGATTCGTTTGGAGCTGCGGTTGTGGAGCCATGGCTCGCTGCTCATGCAAATCCATCGAGGTGTATTCTTCTAGGTGTGAGTTGTGGTGCAAATATTGCCGACTATGTGGCTCGAAAAGCTGTAGAAGCCGGCAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTCCTGATGTATCCATTTTTCATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAAGTCTTACTTTTATGACAAGGCTATGTGTATGTTAGCATGGAAACTTTTCCTAAACGAGGAAAAATTTAACCTCGACCATCCAGAAGCCAATCCCCTTGCCCCAGGCCGGGGTCCTCCCTTGAAGTTGATGCCTCCAACATTGACAGTGGTAGCGGAACTTGACTGGATGAGGGACCGAGCCATCGCTTACTCGGAGCAGCTCAGGAAAGTGAATGTTGATGCGCCTGTTCTGGAGTATAAAGATGCAGTCCATGAATTTGCAACGCTTGATGTACTTATCAAAACCCCAGAGGCCCAGGCTTGTGCTGAGGACATCGCCATCTGGGTCAAGAAATATACCTCACTTAGGGGTCACGAATTCTCGTATTGA 1362 0.5404 MPTVAVKLYSVFFKFLLKQRLQNRIQDSLQESDPFGVTSRPGESVAAANPSFSDGVATKDIHIDTFTSLSVRIFLPESALAEPELARGSKPHHLKSITDSTNKLAQAGPGLIRAEKASLASRRAGATPREEPRRNSLGPTGEGLSSASGGGGYLGYSPAPGGRRRKLPVIVQFHGGGWVSGSSDSVANDLFCRRIAKLCDAIVVAVSYRLAPENQYPAAFEDGFKVLNWLAKQANLAECSRSMEVRKLDAHKAIVDSFGAAVVEPWLAAHANPSRCILLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVLMYPFFIGSVPTHSEIKLAKSYFYDKAMCMLAWKLFLNEEKFNLDHPEANPLAPGRGPPLKLMPPTLTVVAELDWMRDRAIAYSEQLRKVNVDAPVLEYKDAVHEFATLDVLIKTPEAQACAEDIAIWVKKYTSLRGHEFSY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3125 453 Pfam alpha/beta hydrolase fold 170 418 IPR013094 GO:0016787
Amo10g3125 453 PANTHER CARBOXYLESTERASE 16-RELATED 20 433 - -
Amo10g3125 453 SUPERFAMILY alpha/beta-Hydrolases 53 443 IPR029058 -
Amo10g3125 453 PANTHER ARYLACETAMIDE DEACETYLASE 20 433 - -
Amo10g3125 453 MobiDBLite consensus disorder prediction 117 157 - -
Amo10g3125 453 Gene3D alpha/beta hydrolase 15 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3125 Amo-Chr10 96881770 96883621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3125 1 453 Carbohydrate Esterase AT3G27320 68.817 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3125 - - aip:107622147 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3691 20 147405209 147407086 Amo10g3125 10 96881770 96883621 hybridization