Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo10g3121 | ATGTACTTCTTATATTGTAGGCTTAAGGCATCATTATGCCTTAAAWTTGTGTGCAWGGATTCCTTCTTAGTTCTTATGATGTGGTATATGCTTAGTGGTACGAAACTACCTACATCTGGTGTATCTATCTGTGATTGGGACAAGAGAAGTTCRATACTTTCTGATCCAGACTATTTTATGAAGACTTTTGGGACAAGCGACAACATCTGGAACCTTTCTGACTGTCATGTACTTGGTTGCAAGCTCCATTGTGGTGCGAGTGATTCTTCAAAGAAAAGACTATTTGAACTTCATGAAATATTTAAGATGGTACCTGGTGTTGGAAAACAGCAGAAATCTAACAATTCAAGGATAGTACCTATTGATAATGCTTTCGGATCTGGGATTTGGGAGATATCTGATGATATTTTAACCAAAATTTTAGCTTGCCTTGGTCCAATGGACCTCACTAGGGTATCTGCAACATGTCGACATCTCAGATCCTTGGCTGCTTCAGTAATGCCTTGTACAAAGTTAAATCTCTTTCCTCATCAGCAGACTGCAGTTGAGTGGATGTTGCATCGTGAGCGAAATTTTGAACARTTGCTACATCCCTTATATATTGCTCTCTTAACTGAAGATGGCTTTAGTTTCCACGTGAATACTGTATCTGGGGAAATAATTTCTGAGGAAACTCCCACCATCAGAGATTTTCGCGGAGGGATGTTTTGTGATGAGCCTGGCTTGGGTAAGACTGTAACAACACTTTCTCTTATTGTGAAGACACAAGGTACTCTGGCAGATCCACCAGACGGGGCAGAAGTAATCTGGTGTCAACATAATGGTAACCAGAAATGTGGTTATTATGAGATCAGTGGTAATAATATAACTGGTTTTTGTGTGTTGGGTAAGAGGGATGTGGCCCAAGATACTAGTAAGAATAATGAGAACCATGACTACTCCTCAAAAAGAGCCAGATTGATGAATCCTGCTGGGAAAATTACTACACAAAATGACGTAATTTCTGCAGAAGCTATGAAATCGCCTGTAGATGCATCCTTTGAAGAATCGGTGCCTGCCAGTCGAAGCACTAGGAGTCTCAGTTGCGTCAAGAAAAAACTGAATCTCTCCTTTGAAGATGAAGACTTGATTTTCAAGGAAAGAAGAGTTGGTATGAGATCACATAAAAGAAATCAYGMATCAGATATTGCATCATGTGTACCACCAAATAAACTAGTTAATGCTTCATATGGACGTGGGAAAAGTTCCAAGTTGCGTGGGAATCCTAAAGTTGATTGTTTGGAGTCCAAKGATACATGGATTCAGTGCGATGCATGTCACAAATGGCGAAAGSTTGCAGATAATATTATGGCTAATTCTAGTGCAGCATGGTTTTGTAGTATGAACACTGACCCTTCATATCAGAGTTGTAGTGTCCCAGAACAACATTTCCAGAATAGCTGTAAGATAACATACTTGCCAGGATTTCACTTGAAAGGAACTCTTGGGGGTTTGGAACAAAATATTTCCTTTTTCATTAGTGTTCTTAAGGAGCACTGTACATTGCTGAATTCTCARTCAAAGAAGGCTCTGACTTGGTTGGTTAAACTTTCAGCAGATCRGATTGCAGGAATGGAAACACATGGCATACGGGGGCCCATTTTGAACTCYTGTAGTACRTCTAATGGATATTTTAATGCATTCCACAAAATATTTCAAGCATTTGGCCTTGTAAAGAGAGTAGAGAAAGGTATATGCAAGTGGTACTACCCACAAAATCTTAGCAATTTGACTTTTGATGTGAAAGCACTTGGCATGGCTCTRCGTGAGCCATTAGATTTTGTGAGGCTRTACTTGTCAAGAGCAACCCTCATAGTTGTTCCAGCAAATCTGGTTGATCATTGGAAAACACAAATAGAGAAGCATGTAACTCCTGGTCAATTGCGGGTGTATGTTTGCGTTGATCAGCGGAAGCCATCTGCACACTGTTTAGCTTGGGATTATGATGTTGTTATAACTACCTTTAGCCGTTTAAGTGCAGAGTGGAACCCACGTAAGAGGAGTGTTTTGATGCAAGTACATTGGTTTAGGATAATTTTAGAYGAAGGTCACACTCTTGGCTCAAGCCTGAACTTAACAAACAAGTTGCAAATGGCTATTTCAATGATGGCTTCAAATCGTTGGATACTAACAGGTACTCCAACACCTAACACCCCTAACAGCCAACTCCCACATCTACAACCTCTGCTAAGGTTCCTTCATGAAGAAGCTTATGGACTGAATCAGAAGTCGTGGGAAGCTGGCATCCTTAGGCCATTTGAGGCAGAGATGGAGGAAGGAAGGTCGCGCCTGTTGCATTTAATTCAGAAGTGCATGATTAGTGCAAGAAAGGTAGACTTGCAAAACATTCCGCCATGCATTAAGAAAGTTGTTTATGTGGATTTCAGTGAGGAACATGCTAGAAGTTACAATGAATTGGTACTCACTGTTCGGCGTAATATATTGATGGCTGATTGGAATGACCCTTCACATGTTGAGAGTCTACTGAATCCAAAACAATGGAAATTTCGAAGTGCAACCATAAAGAATGTGAGGCTSTCTTGCTGTGTTGCTGGGCATATTAAAGTTACACATGCTGGAGAAGATATTCAGGAAACAATGGATATTTTAGCACAAAGTGGTCTTGATSCTACTTCRGCRGAGTATAGCTCCATAAGATATAGTCTCCTATTTGGTGGTAATTGTGTCAGATGCAAGGAGTGGTGCCGCCTTCCTCTCATTACACCTTGTCGCCATCTATTGTGCCTTGATTGTGTTTCTTTAGACAATATGAAGTGTACATACCCTGGATGTGGTAAASCATACGAAATGGAGAGTCCTGATTCATTGGCCCGACCAGAAAATCCTAACCCAAAGTGGCCTGTGCCCAAAGATCTTATTGAGTTGCAGCCTTCGTATAAGCAGGATGATTGGGATCCTGATTGGCAATCAACTTCTAGTAGTAAAGTCTCCTATCTTGTCCAGAGGTTAAAAGCTTTGCAAGAAAKCAATGAAGAGATGGGTTTCTGCAAAGCCAAGAGCAATCATGAGCTTGATACTGAGAATAGCTYCCCTATGCATATGAGAGATGGTGGATCATTATTCCAGGAATGTTCTATAAGAAGCACTATGACCAATATGAAACCTGACAAAGTTTTGATATTTTCCCAGTTTCTGGAGCATATACATGTCATTGAACAGCAGTTGACCATTGCTGGTATCAAATATGCTGGAATGTATAGCCCAATGCATTCAAGCAGCAAGAAGAAGTCATTAGCCACATTCCAGCATGATTCAAGTTGTATGGCACTTGTGATGGATGGAAGCGCTGCATTGGGGCTTGACCTGAGTTTCGTTACGCATGTATTTTTGATGGAGCCAATTTGGGACAGAAGTATGGAGGAGCAAGTAATTAGCCGTGCCCATCGCATGGGTGCTTCTCGTCCTATTCATGTGGAAACCTTGGCAATGCGTGGTACCATTGAAGAACAAATGGTGGAGTATTTACAGGATGCTGATAAATGTAGAAGATTTCCTAGTCAAGATRCTCCCAAATCTGTAGATGATAGYGGGGSACGAGGACACCGTTCATTACATGATTTTGCTGAAAGTAGTTATCTACTCAAACTTAGATTTGTATATACTAATCCAGAAACCCTAAAAGGTGTATGA | 3690 | 0.4046 | MYFLYCRLKASLCLKXVCXDSFLVLMMWYMLSGTKLPTSGVSICDWDKRSSILSDPDYFMKTFGTSDNIWNLSDCHVLGCKLHCGASDSSKKRLFELHEIFKMVPGVGKQQKSNNSRIVPIDNAFGSGIWEISDDILTKILACLGPMDLTRVSATCRHLRSLAASVMPCTKLNLFPHQQTAVEWMLHRERNFEQLLHPLYIALLTEDGFSFHVNTVSGEIISEETPTIRDFRGGMFCDEPGLGKTVTTLSLIVKTQGTLADPPDGAEVIWCQHNGNQKCGYYEISGNNITGFCVLGKRDVAQDTSKNNENHDYSSKRARLMNPAGKITTQNDVISAEAMKSPVDASFEESVPASRSTRSLSCVKKKLNLSFEDEDLIFKERRVGMRSHKRNHXSDIASCVPPNKLVNASYGRGKSSKLRGNPKVDCLESXDTWIQCDACHKWRKXADNIMANSSAAWFCSMNTDPSYQSCSVPEQHFQNSCKITYLPGFHLKGTLGGLEQNISFFISVLKEHCTLLNSQSKKALTWLVKLSADXIAGMETHGIRGPILNSCSTSNGYFNAFHKIFQAFGLVKRVEKGICKWYYPQNLSNLTFDVKALGMALREPLDFVRLYLSRATLIVVPANLVDHWKTQIEKHVTPGQLRVYVCVDQRKPSAHCLAWDYDVVITTFSRLSAEWNPRKRSVLMQVHWFRIILDEGHTLGSSLNLTNKLQMAISMMASNRWILTGTPTPNTPNSQLPHLQPLLRFLHEEAYGLNQKSWEAGILRPFEAEMEEGRSRLLHLIQKCMISARKVDLQNIPPCIKKVVYVDFSEEHARSYNELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNVRLSCCVAGHIKVTHAGEDIQETMDILAQSGLDXTSAEYSSIRYSLLFGGNCVRCKEWCRLPLITPCRHLLCLDCVSLDNMKCTYPGCGKXYEMESPDSLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTSSSKVSYLVQRLKALQEXNEEMGFCKAKSNHELDTENSXPMHMRDGGSLFQECSIRSTMTNMKPDKVLIFSQFLEHIHVIEQQLTIAGIKYAGMYSPMHSSSKKKSLATFQHDSSCMALVMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMVEYLQDADKCRRFPSQDXPKSVDDSGXRGHRSLHDFAESSYLLKLRFVYTNPETLKGV* | 1230 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo10g3121 | 1229 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 166 | 255 | IPR027417 | - | |
| Amo10g3121 | 1229 | SMART | fbox_2 | 132 | 172 | IPR001810 | GO:0005515 | |
| Amo10g3121 | 1229 | Pfam | F-box domain | 132 | 166 | IPR001810 | GO:0005515 | |
| Amo10g3121 | 1229 | ProSitePatterns | Zinc finger RING-type signature. | 923 | 932 | IPR017907 | - | |
| Amo10g3121 | 1229 | ProSiteProfiles | Zinc finger CW-type profile. | 427 | 478 | IPR011124 | GO:0008270 | |
| Amo10g3121 | 1229 | PANTHER | TRANSCRIPTION TERMINATION FACTOR 2-RELATED | 44 | 1210 | - | - | |
| Amo10g3121 | 1229 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 687 | 1202 | IPR027417 | - | |
| Amo10g3121 | 1229 | PANTHER | OS01G0952200 PROTEIN | 44 | 1210 | - | - | |
| Amo10g3121 | 1229 | Gene3D | - | 599 | 789 | IPR038718 | - | |
| Amo10g3121 | 1229 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 616 | 745 | IPR014001 | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo10g3121 | - | - | adu:107471940 | 2417.5 |
Showing 1 to 1 of 1 entries