Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3112 ATGTTGCAAAATTTACTTTTTTTAATTTGTTTTGTGGAAAAGAATACATACAACAATTCAATAAATAAAAACTCCAAGGGTTCCTACAGTCGCTGCACTGATAAGTGGGGACAAGTCTTCTTTGTACTTTGTACTATTCAAGGTGCTGTTGATTTTATCTTTGGTGCTGCCCAGTCATTGTTTGAGATATGTAGTATACATGTGATTAGAAGGACATTAGGAAAAGGGTTTGTAGGATATAAAACAGCACAAGAGAAAACAAATTTAACAGATTTAAATGGATTTAGACCTTATGCTAGAGTTCTTTTCTACAACACAAACATGACCAAATTATTCAACCCGCTGATGCTAATCATCTTATTAACATTATTAATTCATTTTAAATTCAAAGCAACAATGTCAATATGA 408 0.3137 MLQNLLFLICFVEKNTYNNSINKNSKGSYSRCTDKWGQVFFVLCTIQGAVDFIFGAAQSLFEICSIHVIRRTLGKGFVGYKTAQEKTNLTDLNGFRPYARVLFYNTNMTKLFNPLMLIILLTLLIHFKFKATMSI* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3112 135 Pfam Pectinesterase 39 95 IPR000070 GO:0030599|GO:0042545
Amo10g3112 135 PANTHER PECTINESTERASE 10-RELATED 34 114 - -
Amo10g3112 135 ProSitePatterns Pectinesterase signature 2. 46 55 IPR033131 -
Amo10g3112 135 SUPERFAMILY Pectin lyase-like 17 117 IPR011050 -
Amo10g3112 135 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 114 - -
Amo10g3112 135 Gene3D - 12 117 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3112 Amo-Chr10 96737615 96738507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3112 27 114 Carbohydrate Esterase AT1G05310 31.818 2.58e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3112 - - ahf:112786588 105.145