Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3107 ATGACGATGCTGTTATTTCTTGTTCGTTGGTGGAGTTGTGTGTTTGTGCTGCGAAATTCAGGAGTTGTTAATGCTCAGTATTACCGAACTGTTGGAGATAAAATCCTTCCATTCAGCAAAATTATTGTTGATTCTTTGGGACATGGCAACTTTTCTACAATTCAATCTGCCATTGATTCTGTCCCTTCCAACAATAAGTATTGGGTTTCAATCAATGTCAAGCCTGGTATTTACAGGGAGAAAGTGACGATTCCAATTGATAAACCTTACATAATATTGAAGGGAAGTGAAAAGATGAGAACTTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACGTTCCAATCCATGGCTGATAATATCGTCGTCAAATCCATTTCTTTTAGAGTAACTAACCATTTATATTTAATTAATTATATCATTCTCTGCCTATTTTTATTTCATCTCTTAAATATTATTTAA 471 0.3524 MTMLLFLVRWWSCVFVLRNSGVVNAQYYRTVGDKILPFSKIIVDSLGHGNFSTIQSAIDSVPSNNKYWVSINVKPGIYREKVTIPIDKPYIILKGSEKMRTWVEWDDHNTTAQSPTFQSMADNIVVKSISFRVTNHLYLINYIILCLFLFHLLNII* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3107 156 PANTHER PECTINESTERASE 10-RELATED 17 138 - -
Amo10g3107 156 SUPERFAMILY Pectin lyase-like 41 134 IPR011050 -
Amo10g3107 156 Gene3D - 38 141 IPR012334 -
Amo10g3107 156 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 17 138 - -
Amo10g3107 156 Pfam Pectinesterase 41 134 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3107 Amo-Chr10 96713733 96714452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3107 51 132 Carbohydrate Esterase AT2G19150 45.122 4.99e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3107 - - adu:107471653 321.627