LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo10g3088	ATGGCACCTCAATTGGTTGCAGCCTCCTGTGGCTTATCTTCTTCACATCTTTGCCATCCTCATGTTCCTCCTATCAGGAGTAGAGTTTTGAGTCCAAAAGGCACTGCTATCAACTTGAAAAAGAGTCATGGCATGTCTCTTCCAGCCATTTCTTTGGGAAGAACATATATCCCATTGTTGACTGCTGTTCCAAGGAAAACAGATAAGCCATCACTGATTGCTGCTTTGGGAAAAACATATGCCGCACTGACAGCTGATTCATCCACATATTTTTCCGGTGACCGAGATCATCTCACACTCAAAACTCCTACATCTCGTGGATCCAATTCGAAGATCCGTGGTCAAGCATACATATATCATTCTTCTGGCTTTCGAATCCCTGCAAATGCAGAGAAGCCAGAATGGTGGTGGAGGACACTATGTTGTATTCCCTATCTAATTGCATTGCAGATGTCTGCAACTGGGTTTTATCTTGAACCTTTACTCGAAAAATTCCCACTTTTCCAAAATCTGATCTACTATATCCCCGGAGCCGTCAACAGACTACCAACCTGGTTCCCCATACTCTATTGCTATTTGGCCATCATTGGAGTTGTAAAGAACAGTAGATTTCCCCTTCTCTTCAGGTACCATGTAATGATGGGAATGCTACTCGAAATCGCGCAGCAGATATTCTGGGTCACGTGCAATTTCGTGCCACTTATACACTTCAAAGGGACACTTGGTATGTATTATTGGGGTGGTGTGGCTTTGGCATATATTCTCATATTGGGAGAGTGTATAAGGTGTGCACTTCTGGGTACCTTTGTGAAGATCCCTGTTATTAGTGAATCAGCATTCATTCATTCTCTATATGGTTTAGGATTAAGGTAG	873	0.4296	MAPQLVAASCGLSSSHLCHPHVPPIRSRVLSPKGTAINLKKSHGMSLPAISLGRTYIPLLTAVPRKTDKPSLIAALGKTYAALTADSSTYFSGDRDHLTLKTPTSRGSNSKIRGQAYIYHSSGFRIPANAEKPEWWWRTLCCIPYLIALQMSATGFYLEPLLEKFPLFQNLIYYIPGAVNRLPTWFPILYCYLAIIGVVKNSRFPLLFRYHVMMGMLLEIAQQIFWVTCNFVPLIHFKGTLGMYYWGGVALAYILILGECIRCALLGTFVKIPVISESAFIHSLYGLGLR*	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo10g3088	290	Pfam	Chloroplast import apparatus Tic20-like	111	279	IPR005691	-
	Amo10g3088	290	PANTHER	PROTEIN TIC 20-IV, CHLOROPLASTIC	71	288	-	-
	Amo10g3088	290	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	71	288	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo10g3088	Amo-Chr10	96580459	96583519	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo10g3088	24	288	Chloroplast and Mitochondria Gene Families	AT4G03320	43.820	4.90e-72	221

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo10g3088	-		-	ahf:112782565	580.482