Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3087 ATGCTTCTCTCTATCTCAGTTCTCACACCAAAGCTTCAGTTATTTATAACAATGGAGGAGAACGGAGCGCTCTTCCTCTTCTCTCTCTCACTTCTACTTCTCCCGCTTTCCTCCTCTTCCGCTCAGATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAATTTCACTGATGAGATTGGTCTTAAATGGAGCCCTGATGATAAGCTTCCTTATGGAGAAGTAAGCACCATATCAGTTGCYAACGAGACYCGGCGGCAGTACACCACGCTTAGACACTTCCCTGCTGATACCAAGAAATACTGCTACACACTTGATGTTGTGAGCAGGACAAGGTACCTACTGAGGGCCGCATTCCTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACATTTCTATTGGGGCTACACATTGGTCTACCATTGTTATATCAGATGCTAACCTTATAGAAATGAGAGAGCTTATATTTTTGGCTTCAAGTTCTGCTGTGAGTGTGTGTTTATCGAACGCCACAACAGGGCAGCCGTTCATATCTACACTTGAGCTCCGGCAATTCAATGGTTCCGTTTATTATACACAATATGAGGAACAATTTTACCTCAGTGTCTCTGCACGGATAAATTTTGGAGCAGAAAGTGATGCTCCAATCAGGTATCCTGATGATCCTTTTGATAGAATATGGGAGTCGGATTCTGTGAAGAAAGCAAATTTTCTTGTTGATGTTGCTGATGGTACCAAGAAAATCTCAACCGAAGTACCAATTGATGTTAACAGAGACGAAATACCCCCAATGAAAGTGATGCAGACAGCAGTAGTAGGCACAAATGGGTCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCTCTTATTGTGCAGAAATTGAAGATTTAGGTCCAAATGATTCCAGAAAATTTAGGCTAGTACTTCCAGGCCAGCCTGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAGGGAAAGTATCGCCTCTATGAACCAGGATTTAACAACATATCCCTGCCCTTTGTGCTTTCTTTTAGATTTGGCAAGACCTCTGATTCTTCCAAGGGTCCTCTTCTAAATGCAATGGAGATAAATAAATATTTGGAGAAAAATGATGGCTCTATTGATTTAGCAGCTGTTTCTAGTGTATTGTCACACTACCCTTCGGCAGATTGGGCACAAGAGGGAGGGGACCCTTGTCTACCTGTTCCATGGTCATGGATCCGCTGTAATTCYGATCCWCAACCAAAAGTAGTTTCAGTCTTATTGTCCGGTAAAAACCTGACTGGAAATYTTCCTTTGGATATCACCAAARTGACTGGTCTAGTTGAACTATGGCTTGATGGAAACATGTTAACTGGCCCAATACCAGATTTTACTGGGTGCATGYACWTAAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGTCCTCCCAACATCTCTGCTGAACCTTCCAAATTTAGGAGAAATGTATGTGCAAAATAATTTGTTATCTGGAACAATACCATCTGCTCTTCTGAGCAAAGATTTGGTTTTAGACTACTCTGGAAACATTAATCTTCACACGGGGAAAAGAATAGAGGGCAAAACGTATGTTATTATTGGTTCCACAGTGGGGGCTTCTGTTCTATTATTGGCCACTATTATATCTTACTTGTTTATGCGTAAAGGAAATAGAAGGTATTTTGAGCAAGATCACAACTCTTCTCTCCCTACTCAAAAGCTGGCTTCCTGGAAAAATGATGATSCTGCAGAAACTGCTCACTGCTTCAGTTTTTCCGAAATTTTAAATGCCACAAATAATTTTGAGAAAAAGATTGGTTCTGGTGGTTTTGGAGTTGTGTACTACGGGAAACTGAAAGATGGAAAAGAGATAGCTGTAAAAGTTTTGACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACACTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTTCTTGGGTATTGCCGGGAGGAAGATAGTAGCATGCTCGTTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTCTATGGTCCATTAACGCATGGACGGAGTATCAATTGGATTAAGCGGCTTGAGGTTGCAGAAGATGCTGCAAAAGGGATTGAATACCTTCATACGGGTTGTYTTCCTGTRGTTATCCATAGAGATGTAAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGKGTTTCCCATGTTTCTAGCATAGTTCGGGGGACAGTAGGATATCTTGATCCTGATCTGGTTTATCACATAGCAAAGAGGCTGTTGATGAAGTCAACCTCCTTCATGTTTTACAGATTAAATAATAATTTTGATGAGGTAAATTACTTTAACTTGTATATGAATGATTTACATGCTATTATTGATGATCTCACTTTAAACACCTAA 2514 0.4006 MLLSISVLTPKLQLFITMEENGALFLFSLSLLLLPLSSSSAQMQGFVSLDCGGSENFTDEIGLKWSPDDKLPYGEVSTISVANETRRQYTTLRHFPADTKKYCYTLDVVSRTRYLLRAAFLYGNFDNNNVYPKFDISIGATHWSTIVISDANLIEMRELIFLASSSAVSVCLSNATTGQPFISTLELRQFNGSVYYTQYEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANFLVDVADGTKKISTEVPIDVNRDEIPPMKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFSYCAEIEDLGPNDSRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFNNISLPFVLSFRFGKTSDSSKGPLLNAMEINKYLEKNDGSIDLAAVSSVLSHYPSADWAQEGGDPCLPVPWSWIRCNSDPQPKVVSVLLSGKNLTGNXPLDITKXTGLVELWLDGNMLTGPIPDFTGCMXXKIIHLENNQLTGVLPTSLLNLPNLGEMYVQNNLLSGTIPSALLSKDLVLDYSGNINLHTGKRIEGKTYVIIGSTVGASVLLLATIISYLFMRKGNRRYFEQDHNSSLPTQKLASWKNDDXAETAHCFSFSEILNATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDSSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEVAEDAAKGIEYLHTGCXPVVIHRDVKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPDLVYHIAKRLLMKSTSFMFYRLNNNFDEVNYFNLYMNDLHAIIDDLTLNT* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3087 837 SUPERFAMILY L domain-like 417 533 - -
Amo10g3087 837 SMART serkin_6 616 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3087 837 PANTHER OS07G0107800 PROTEIN-RELATED 29 806 - -
Amo10g3087 837 SUPERFAMILY Protein kinase-like (PK-like) 602 793 IPR011009 -
Amo10g3087 837 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Amo10g3087 837 Gene3D Phosphorylase Kinase; domain 1 590 691 - -
Amo10g3087 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Amo10g3087 837 ProSiteProfiles Protein kinase domain profile. 616 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3087 837 Pfam Protein kinase domain 618 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3087 837 Gene3D Ribonuclease Inhibitor 390 542 IPR032675 -
Amo10g3087 837 Pfam Malectin-like domain 49 379 IPR024788 -
Amo10g3087 837 PANTHER TYROSINE KINASE DOMAIN PROTEIN 29 806 - -
Amo10g3087 837 Gene3D Transferase(Phosphotransferase) domain 1 692 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3087 Amo-Chr10 96561914 96569934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3087 36 726 Receptor kinase-like Gene Family AT2G37050 67.479 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo10g3087 Malectin_like 2.3e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3087 - - gmx:100784017 1342.41