Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3075 ATGCTCTGTGGCAAGCTAGAAGTCTCTGAGGTGGTCGAGGAAGAGCATGGAGATGATGGAGCAGGAGTAGAAAATGAAGATTGTACCCTTGAAAACTTAGACTTGACTGCTTTTCCCAACCTCTTACAACTTGATCTCAAAAGAAATAATCTTACAGGCACCATACCCCAAAACATTGGGATACTCTCAAAACTTCAATTCCTTGACCTTTCCACCAATTCTCTCAATGGCACTTTACCTCTTTCTATTGCAAATCTCACCAAAGTCTATGAGCTTGATGTGTCAAGAAATAACATAACAGGAACACTAGACCCTCGCTTATTTCCTGATGGAACCAATGAGCCAAGAACTGGCCTCATTAGCATCAGGAATTTCTTGTGTGAAACAACCCTTTTAGGTGGAAAAATTCCAAATGAAATAGGCAATATAAGAAACTTGACATTGCTAGCTTTAGATGATAACAACTTTTATGGGCCTATACCTCCATCTATAGGAAATTGCACACATTTAAGTGTTCTTAGAGTGAATCAAAACCATTTCTCAGGTACAATACCTTCTAGCATTGGCAAGTTAACAAATCTAACAGACTTGCGGTTTCAAATCAACAACTTAACCGGCACGGTGCCACGAGAATTCGGAAACTTATCTTCATTAGTTGTACTTCATCTCGCTGAAAACAACTTTGTTGGAGAATTGCCACCTCAGGTGTGCAAAGGTGGAAAGCTTGTCAACTTCAGTGCAGCACACAATAATTTCAATGGTTCAATCCCAAGAAGCCTTAGAAACTGCCCAACATTGTATCGAGTTCGAATCGAGTACAATCAGTTGACAGGCTATGCAGATCAAGATTTTGGAGTGTATCCAAACCTCACTTACATTGATTTCAGTTACAACAGGATTCGAGGCCAGTTGTCTGCAAAATGGGGTGCCTGCAAGAACTTGCAAGTACTTAAAATGGCTGGCAATTCCATAAGAGGCTTTATTCCAGAAGAAATTTTTCAACTGAAGCAGTTAGAAAGGCTTGACCTGTCCTATAATCAAATCTCAGGGAAGATTCCTTCACAAATTGAAAATGCAAGTCGCTTGTATGAATTGAATTTGGGTGGCAACAAACTTACTGGTATGACACCAGAAGAAATTGGAAAGCTTTCTAATTTGGAGGCCTTAGACTTGTCCAAGAACATGTTGTTTGGACCAATCCCAAATCAGATAGGGGATTGCACCAAGTTGCTGAGTTTAAATTTGAGCAACAATCACTTGAATGGCACAATCCCTTACCAAATAGGAAATCTTGCAGCCTTGCAAGAATCTTTGGACCTGAGTTACAATTCATTTTCAGGGGAAATTCCTGCTGATCTTGGTAAGCTTGTGAATTTGGTAAGCTTGAATCTCTCTCACAACAATCTCTCTGGTCGAATCCCCGAGTCCCTTGGTGAAATGTTGAGCTTGTTAACCATCAACCTCTCTTCCAATCATCTGGAAGGCCCTGTGCCTAGAAATGGCATATTCAACGCTTCACTTCTTCCAATGGATTTGAGAAACAACAAAGGTTTATGTGGCAATATCCAAGGTTTGCAATGTGAAGTCTCAGTCACTGAACCTGTTGATGGAAGTAGTAAAAGAAATGAAGTAGTAATACTTTCTGCTGTTATATTGGGAGGAATTTTGTTTCTTTCATTGGTGTTAGTTGGGATTTTGTGCTTCAAGAAAAAGCCAAAACCAACAGTTTCAAAACAAAACTTTTCAGCAAGCATGAGAGAAAATCAAAATCTGTTTTCAATTTGGTCATTCAACGGCAAAATTGTCTATAGAGATATAATTGAAGCTACCAACAACTTTGACAGCCATTGCTGCGTCGGCGAGGGAGCGATCGGGAGAGTTTACAAGGCAGTTATCAAAGGAGGCCAACAAGAAGAAGTATTTGCTGTGAAAAAGTTGAAATGTGAATCAGAAAGCTTAGATGTTGAGAGTATAAAATCCTTCCAGAGCGAAGTGGAAGCCATGAGAGAAACGCGCCATAGAAACATTGTGAAACTCTATGGATTCTGCTCTAACAAGACACACACATTCTTGATCTATGAGTATTTGGATCGAGGGAACTTAGCTGAGATGCTTGGAAATGATAGCAAAGCATTGGAACTGGATTGGCCTAAGAGGGTGAACATTATCAAAGGCGTGGCGCATGCTTTGTCCTATATGCATCATGATCACACTCCACCATTGATTCATAGAGACATATCGAGCAAGAACATTTTGCTGTCCTCCAATCTTGAAGCTCGTGTCTCCGATTTCGGCACTGCTAGGTTCTTGAAGCCGGATTCATCGATTTGGACGTCGTTTGCAGGCACATATGGCTATGCTGCTCCAGAACTCGCTTACACGATGGTGGTGACTGAGAAATTGGATGTGTTCAGCTTTGGCGTTTTGGCCTTAGAAGTTATTTCAGGAAAGCACCCCGGTGATGTTGTTCTTCAAATAAAAGCTTCTAGTGAATCAAGTATAAACATGATTGAAGTTTTAGACCCACGCCTCTCACATCCAACAAATGAACATATTCTGAAAGAGTTGACCTCGATTGCAAATATAAGTCTTTCGTGTTTGCAGACAAGCCCTCAATCTCGGCCAACCATGCGAAGCATTGCTCGACTGCTTGAAATAGAAGCTGCAGAAAACTATTGA 2679 0.4072 MLCGKLEVSEVVEEEHGDDGAGVENEDCTLENLDLTAFPNLLQLDLKRNNLTGTIPQNIGILSKLQFLDLSTNSLNGTLPLSIANLTKVYELDVSRNNITGTLDPRLFPDGTNEPRTGLISIRNFLCETTLLGGKIPNEIGNIRNLTLLALDDNNFYGPIPPSIGNCTHLSVLRVNQNHFSGTIPSSIGKLTNLTDLRFQINNLTGTVPREFGNLSSLVVLHLAENNFVGELPPQVCKGGKLVNFSAAHNNFNGSIPRSLRNCPTLYRVRIEYNQLTGYADQDFGVYPNLTYIDFSYNRIRGQLSAKWGACKNLQVLKMAGNSIRGFIPEEIFQLKQLERLDLSYNQISGKIPSQIENASRLYELNLGGNKLTGMTPEEIGKLSNLEALDLSKNMLFGPIPNQIGDCTKLLSLNLSNNHLNGTIPYQIGNLAALQESLDLSYNSFSGEIPADLGKLVNLVSLNLSHNNLSGRIPESLGEMLSLLTINLSSNHLEGPVPRNGIFNASLLPMDLRNNKGLCGNIQGLQCEVSVTEPVDGSSKRNEVVILSAVILGGILFLSLVLVGILCFKKKPKPTVSKQNFSASMRENQNLFSIWSFNGKIVYRDIIEATNNFDSHCCVGEGAIGRVYKAVIKGGQQEEVFAVKKLKCESESLDVESIKSFQSEVEAMRETRHRNIVKLYGFCSNKTHTFLIYEYLDRGNLAEMLGNDSKALELDWPKRVNIIKGVAHALSYMHHDHTPPLIHRDISSKNILLSSNLEARVSDFGTARFLKPDSSIWTSFAGTYGYAAPELAYTMVVTEKLDVFSFGVLALEVISGKHPGDVVLQIKASSESSINMIEVLDPRLSHPTNEHILKELTSIANISLSCLQTSPQSRPTMRSIARLLEIEAAENY* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3075 892 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 28 888 - -
Amo10g3075 892 Gene3D Ribonuclease Inhibitor 15 113 IPR032675 -
Amo10g3075 892 Gene3D Ribonuclease Inhibitor 401 528 IPR032675 -
Amo10g3075 892 SMART LRR_sd22_2 383 415 - -
Amo10g3075 892 SMART LRR_sd22_2 62 88 - -
Amo10g3075 892 SMART LRR_sd22_2 191 217 - -
Amo10g3075 892 SMART LRR_sd22_2 335 361 - -
Amo10g3075 892 SMART LRR_sd22_2 456 479 - -
Amo10g3075 892 ProSitePatterns Tyrosine protein kinases specific active-site signature. 741 753 IPR008266 GO:0004672|GO:0006468
Amo10g3075 892 MobiDBLite consensus disorder prediction 1 25 - -
Amo10g3075 892 SUPERFAMILY Protein kinase-like (PK-like) 604 886 IPR011009 -
Amo10g3075 892 Pfam Leucine Rich Repeat 458 478 IPR001611 GO:0005515
Amo10g3075 892 SUPERFAMILY L domain-like 286 523 - -
Amo10g3075 892 Gene3D Ribonuclease Inhibitor 302 400 IPR032675 -
Amo10g3075 892 SMART LRR_typ_2 86 110 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 456 480 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 191 214 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 38 62 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 335 359 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 383 407 IPR003591 -
Amo10g3075 892 SMART LRR_typ_2 215 239 IPR003591 -
Amo10g3075 892 Gene3D Transferase(Phosphotransferase) domain 1 696 891 - -
Amo10g3075 892 PRINTS Leucine-rich repeat signature 65 78 - -
Amo10g3075 892 PRINTS Leucine-rich repeat signature 383 396 - -
Amo10g3075 892 Pfam Protein kinase domain 619 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3075 892 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 28 888 - -
Amo10g3075 892 SUPERFAMILY L domain-like 122 350 - -
Amo10g3075 892 Pfam Leucine rich repeat 311 348 IPR001611 GO:0005515
Amo10g3075 892 Pfam Leucine rich repeat 360 420 IPR001611 GO:0005515
Amo10g3075 892 SMART serkin_6 613 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3075 892 Gene3D Ribonuclease Inhibitor 117 301 IPR032675 -
Amo10g3075 892 Gene3D Phosphorylase Kinase; domain 1 575 695 - -
Amo10g3075 892 ProSiteProfiles Protein kinase domain profile. 613 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3075 892 SUPERFAMILY L domain-like 35 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3075 Amo-Chr10 96482532 96486696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3075 43 789 Receptor kinase-like Gene Family AT4G08850 43.243 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g3075 Pkinase 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3075 - - ahf:112786571 1627.07