Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3073 ATGGTTTTGGAACTCGTTGGTGGAGCTTTTCTAGGAGCTGTGTTTAATGTACTGCTTGAAAGAATAGCTTCCCCTGAAGTACTCAGCTTCTTGAAGGGGAAGAAAATGAACAACAGGTTGCTGAAGAAGTTGAAGCTGATTTTGCTGTCAGTTCATGGAGTTCTTGATGATGCAGAGGGAAAGCAGATTACAAATCCAGCAGTGAAAGAATGGCTAGATGAGCTTAAAGATGCTGCATATGAAGCTGATGATTTGTTGGATGAGATATACACAAGATCTAAATATGGTGCTGCTGAGGTATGCAACTTTGACTTTAATTCTTGGAGCTCATTTGAGAATGAAGTTGAAGAAAAAATGGAGGAGATCATTGAGAAGTTAGAATTTATCGCGAAGCAGAAAGATTTCCTCGGTCTAACTGGGGATATAGGAGTCAAGATCCCACAGAAGACTCCCACAACATCTATAGTTGAAGGGTCTAATGTATATGGAAGAGATGATGATAAGGAGTTCATGATCAAGCTACTATTTGATGTTGAAAATGGTGATAACAAGATAGGAGTGGTTCCTATTGTTGGCATGGCCGGAATTGGAAAAACAACCTTGGCTCAACTTGTTTACAATGATGTTAGAGTGAAGGAACACTTTGATCTCAGAGCTTGGGTCTGTGTTTCTGAGGATTTTGACATATTCAAGATTACTGAAACACTTTTGGAGATTCTCACCATGTGCAATCATGCTATTAGAGATCTAGATTCGCTTCAAGTTGAACTGAAGAGGAGGTTGAAAGGGAAGAAGTATTTGTTCGTTTTGGATGATATGTGGAATGAAAACTATGATGATTGGGACATGTTGAGAAGTCTTCTTCAATATGGTGCTCATGGGAGTAAGATCATTGTGACTACAAGAAGCGAGCGAGTAGCATCAATCATGCAAACCATTCCATCATATCACTTGGGATATTTATCAGATGAAGATTGTTGGATGTTGTTCGCAAAGCATGCGTTTGATTATAGAAGCTCTGATACCTATAAAATCTTGGAAGGAATTGGTAAAAGCATTGCTAAGAAGTGTAAGGGGTTGCCTCTGGCTGCGAAAACATTAGGAGGTCTATTGCGCTCTAAAACAGATGTGAAAGAATGGGACAACATATTGAAGAATGAGATATGGGAGTTGTCAGATAGAAAGAGCAATATTCTTCCAGCTTTGAGATTGAGTTATTATTATCTCCCTTCACATTTAAAGCGATGTTTTGCTTACTGCTCAATCTTTCCTAAAGGGTACGAATTCGACAGAGAGGAGTTGATATTGTTATGGATGGCAGAGAATCTACTGAAAGAACCAAAAAGAAACAGAAGACTTGAAGAAGTTGGAGATGAGTACTTTCATGAATTGGTAGCAAGGTCATTTTTCCAACAATCAAGACATAATGGATCACTCTTTGTGATGCATGATCTTATCAATGACCTTGCTAAATACGTATCTGGAAAATTCTGCATCAGATTGGAAAACAACTTGGATGAAGATGCCGGGGAAAGGACTCGTCACTTGTCACAAATTATTGCAAATAGGTATCCATCTATAAACTTTGATGCTTTCCAAAAGGCAAGTGGTCTACACACTTTTTTGCAATTAAGCTTGGTGGATCCACCAATATGCCTTTTCAACAAGGTGCCAAAGGATCTGTTTATGAAGCTAAGGCGCTTGCGAGTGTTATCTTTGGTTGGTGCGCGTGGTAGTCTTAACGAATTGCTCCATTTCATTGCCAAACTCAGACATCTGAGATACTTGGATGTGTCACAAACTCAAATAAAGAAGTTGCCTGGTTCCATCTGTACTTTATACAACTTACAAACACTCAAGGCTGCAAGATGTCCTCATCTCACAGAATTGCCAAGGAATATGCATTGTCTAGTCAATTTAAGATACCTTGACATCTCGTTTTCTCGGCTAGAACGGATGCCATTGCACATGAGTAAACTAAAAAGCCTGCAAAAGTTGAGCAATTTCTTCGTGAGCAAGGAATCTGCTTCCTCGATTGGTGAATTAGGCGAACTATCACATCTAAGAGGTTCTTTGATGATTCAAAACATAAAGAATGTGGTTGATCCTAAAGATGCAATGAAAGCAAGTTTGAAGGACAAGAGGAATCTTGATAAGTTGACTTTTGATTGGGGAAGGTCTGCTGATACAGAAAATTCCCAGCATGAAAAGAACATACTCGAAAAGCTGCAGCCGAATACAAATTTGGAAGCCCTTGAAATTGTGCACTACACAGGTACTCAGTTTCCAACTTGGTTGGGAGATCCTTCATTCTTCCACCTAGTTTCTCTGTCACTTAATCATTGTAAATATTGCCACATATTGCCATCACTTGGACAGCTTCCATATCTTAAAGAACTACATATTTCAAAGTTTAAGGAGCTAGTTAGCATTGGACCTGAATTTTATGGAGTCAGTGGTTGCACAGGGAATCAACATTTTCCTTCTCTTGAAATTCTAACATTTTATGGCATGCCGGCGTGGGAGAAATGGATTCATGCAGGTGAAAGTGAAGGCTGCAAAGTTTTCCCTTGTCTCAGAGAGCTTCATTTGGAGGAATGTCCACAACTATCTGGTGATTTGCCTACTTTTCTTCCTTCTCTTACAAATCTTACCATGAGATACTGTAATCAGATTTCAACTTCACTCCCAAGAGCTCCGGCTATGCGATCATTACATGTTGATAACTGTTGGAAAGTAGAAATCCTAGAAGAACTAATGGGGTGCCGGGAATCACTTGAATCATTAGAGATATACAATAGCTGCCACTCTCTGAAGTCTTTCCCACTAGATTTCTTCCCCTATCTTAAGTCCTTGGTAATCTGGGGGTGTGAAAATCTAGAATCTCTAACTACTTCAGCGCCACAGACGGAGGGAACACTCGAGCTTCTAGCATCTCTAAATTCATTGTGCATATGGAGATGTCACAACTTTGTGAACTTTCCTCATGCAGGATTGCCTACACCCAACCTTGCTTCTTTGAAAGTTCGCTACTGCAGCAAGTTAAGTTCACTTCCTAAACAAATGCATACTCTTCTCCCAAGTTTAAAGGAACTCCAAGTTTGGAGTTGTCCAGAAATCAAGTCACTTCCAAATGGAGGTTTGCCAATTAATTTGAAGTCATTCAAGATTAGAGATTGTGACAACCTCTTTGCTCGCCGGCTGGACTGGAATATGTCGTGCTTGGCCTCGCTCGAGCACTTTTCAGTTGAGGGAAAATGTGAAGATGTTGAGTCCTTTCCAGAGGAAGGTTTGCTTCCTTCCACACTAACACAACTGGAGATTCAAGGTTTATCAAACCTTAAAACTTTGGATATGAAAGGGCTTCAAAACCTCACTTCTCTCAAGAAAATTCAGATCCTTGATTGTTGTAAGCTTGAGTCACTAGGAGAAGGAGGAACATTGCCTTTATCTGCAGTTGATCTTGATATTTGGAAGTGTCCTTTACTGAAAGAGCAGTGGCAGAGAGAGAACAAGCCCAACATTTCTGGCAACCATGGCATTTGGATCTGTGACCAATACATTGAAGTGGATGAGCAGCATGATTTGTAG 3591 0.4002 MVLELVGGAFLGAVFNVLLERIASPEVLSFLKGKKMNNRLLKKLKLILLSVHGVLDDAEGKQITNPAVKEWLDELKDAAYEADDLLDEIYTRSKYGAAEVCNFDFNSWSSFENEVEEKMEEIIEKLEFIAKQKDFLGLTGDIGVKIPQKTPTTSIVEGSNVYGRDDDKEFMIKLLFDVENGDNKIGVVPIVGMAGIGKTTLAQLVYNDVRVKEHFDLRAWVCVSEDFDIFKITETLLEILTMCNHAIRDLDSLQVELKRRLKGKKYLFVLDDMWNENYDDWDMLRSLLQYGAHGSKIIVTTRSERVASIMQTIPSYHLGYLSDEDCWMLFAKHAFDYRSSDTYKILEGIGKSIAKKCKGLPLAAKTLGGLLRSKTDVKEWDNILKNEIWELSDRKSNILPALRLSYYYLPSHLKRCFAYCSIFPKGYEFDREELILLWMAENLLKEPKRNRRLEEVGDEYFHELVARSFFQQSRHNGSLFVMHDLINDLAKYVSGKFCIRLENNLDEDAGERTRHLSQIIANRYPSINFDAFQKASGLHTFLQLSLVDPPICLFNKVPKDLFMKLRRLRVLSLVGARGSLNELLHFIAKLRHLRYLDVSQTQIKKLPGSICTLYNLQTLKAARCPHLTELPRNMHCLVNLRYLDISFSRLERMPLHMSKLKSLQKLSNFFVSKESASSIGELGELSHLRGSLMIQNIKNVVDPKDAMKASLKDKRNLDKLTFDWGRSADTENSQHEKNILEKLQPNTNLEALEIVHYTGTQFPTWLGDPSFFHLVSLSLNHCKYCHILPSLGQLPYLKELHISKFKELVSIGPEFYGVSGCTGNQHFPSLEILTFYGMPAWEKWIHAGESEGCKVFPCLRELHLEECPQLSGDLPTFLPSLTNLTMRYCNQISTSLPRAPAMRSLHVDNCWKVEILEELMGCRESLESLEIYNSCHSLKSFPLDFFPYLKSLVIWGCENLESLTTSAPQTEGTLELLASLNSLCIWRCHNFVNFPHAGLPTPNLASLKVRYCSKLSSLPKQMHTLLPSLKELQVWSCPEIKSLPNGGLPINLKSFKIRDCDNLFARRLDWNMSCLASLEHFSVEGKCEDVESFPEEGLLPSTLTQLEIQGLSNLKTLDMKGLQNLTSLKKIQILDCCKLESLGEGGTLPLSAVDLDIWKCPLLKEQWQRENKPNISGNHGIWICDQYIEVDEQHDL* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3073 1196 PANTHER OS05G0414200 PROTEIN 22 964 - -
Amo10g3073 1196 PRINTS Disease resistance protein signature 187 202 - -
Amo10g3073 1196 PRINTS Disease resistance protein signature 260 274 - -
Amo10g3073 1196 PRINTS Disease resistance protein signature 357 371 - -
Amo10g3073 1196 PRINTS Disease resistance protein signature 588 604 - -
Amo10g3073 1196 Gene3D - 19 131 - -
Amo10g3073 1196 Coils Coil 68 88 - -
Amo10g3073 1196 SUPERFAMILY L domain-like 851 1160 - -
Amo10g3073 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 420 IPR027417 -
Amo10g3073 1196 Gene3D - 145 314 IPR027417 -
Amo10g3073 1196 Gene3D Ribonuclease Inhibitor 528 847 IPR032675 -
Amo10g3073 1196 PANTHER DISEASE RESISTANCE PROTEIN RP 22 964 IPR044974 GO:0006952
Amo10g3073 1196 Coils Coil 112 132 - -
Amo10g3073 1196 Pfam NB-ARC domain 171 403 IPR002182 GO:0043531
Amo10g3073 1196 Pfam Rx N-terminal domain 10 94 IPR041118 -
Amo10g3073 1196 Gene3D - 320 404 IPR042197 -
Amo10g3073 1196 SUPERFAMILY L domain-like 481 894 - -
Amo10g3073 1196 Gene3D - 405 492 IPR036388 -
Amo10g3073 1196 Gene3D Ribonuclease Inhibitor 871 970 IPR032675 -
Amo10g3073 1196 Gene3D Ribonuclease Inhibitor 1049 1151 IPR032675 -
Amo10g3073 1196 Gene3D Ribonuclease Inhibitor 971 1048 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3073 Amo-Chr10 96467009 96471221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3073 160 306 WRKY Transcription Factor Family AT4G12020 31.013 2.39e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3073 - - aip:107624366 2380.9