Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3062 ATGGCCAATGTGCTTTTGGAGAAAGGGATTGATTTGAATGCAGAGGATGAAGAAGGCTTTTGTTCTGATGTGGCAGAGGTTTTGGTGAAGAAAGGTGCTGATGTTGAAGCCAGGAGTAAGAAGGCTATTGTTGCTTGTGTTCCAACAAAAGTTCACATTGAGGGAGCAGGTGAAACAGAATTCAAGATATCTCCAACTGAAATTACAGATGCTATGAAAGCAGGATTGGATCAGCCTATAATGCCAGAGCCTGAGATTGTTGCTTTATTCGTACAAAGTGACACCATGCTTTGGTTAATTAACCAGGATGAAAAACATGAAAACAAAGGAAAAGATGAGAGCTGTGAAGCTGCTGAAAGCGAGAGATGTAGTATAAATGTGATTGGAAGGGTTTTAGGAAAAGGGTTTGTAGGATATATTACATCACAAGGGAGAACAAATTCAATTGATTCAAATGGATTTGTATTTAAGAATTGCAATGTTTTTAGAAATGGTTCTACTTTCTTGGGAAGACCTTGGAGACCTTATGCTAGAGTTCTTCTCTACAACACAAACATGACCAACATTATTCAACCCGCTGGGATAGCGTTATATTTGCTGAATATGGCAATTTTGGAG 618 0.3867 MANVLLEKGIDLNAEDEEGFCSDVAEVLVKKGADVEARSKKAIVACVPTKVHIEGAGETEFKISPTEITDAMKAGLDQPIMPEPEIVALFVQSDTMLWLINQDEKHENKGKDESCEAAESERCSINVIGRVLGKGFVGYITSQGRTNSIDSNGFVFKNCNVFRNGSTFLGRPWRPYARVLLYNTNMTNIIQPAGIALYLLNMAILE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3062 206 PANTHER PECTINESTERASE 10-RELATED 121 194 - -
Amo10g3062 206 Gene3D - 115 199 IPR012334 -
Amo10g3062 206 Pfam Pectinesterase 134 197 IPR000070 GO:0030599|GO:0042545
Amo10g3062 206 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 121 194 - -
Amo10g3062 206 SUPERFAMILY Pectin lyase-like 118 195 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3062 Amo-Chr10 96330865 96333383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3062 138 194 Carbohydrate Esterase AT1G05310 43.860 5.32e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3062 - - aip:110268508 131.339