Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3049 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCACAAGCTCATTGAAAGGTTGAAGACTAATCTTTGTGCTGTTCGAGCCTTTCTCATAGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTTGATAGTCTCAAAGATGCCATGTATGTTGCTGATGACTTGCTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTCTCTGGTATTCTCAATTTGCAAGATCGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTSAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAGAAGACAAGGAGGCCATACTAAAACTGTTGTTGGATGATGATAGTGATGATGATACTGGTGGTCAGAGTGATGTATCTGTGATTCCCATTGTCGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAGGATGACAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTAAAAGTTTTTGCAGCTTGACGGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAATTGTCAAGGAAGAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGGATAAACTTCTCAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCACCATATGAACTAAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCAAAATACGCACGTCTCTCAACTTGTTCTATGGAGAATCCAACCTTGAAAAAAGTTGGCAAAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGTGGAAATTCGGATATCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCGATGATAAGATAAAGGTTGTTCCCGCATTAAGAATCAGTTATTACTATCTTCCTTCATATTTAAGGGAGTGCTTTGTTTTTTGTTCTTTGTATCCCAAAGACTATGAGTTTAGCAAAGACGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGCAGGAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTGATTGCGAGATCATTTTTTCAACCTTCTAAGATTCGTGAAAACAAGTTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATATTTGGTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTTGAGGTTGATATTAAAACTCGCCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGAAATCAATTTGGAGCGAGAGATTCCATTTAACATGGAAAATGCACCATGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAAATGCTTTCCTCTTGAGTCATTGCCTGATTCAATAGGAGAGTTGATTCATTTGCGTTACTTGGATTTGTCTTGGACCGACATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAGACATTGAAGCTGTTTGGATGTTGGAAACTAAACGCCCTTCCTGTTGGCATGAAAGATCTTACAAATTTGCGTTACCTTGATATTACCCATACTGGTTTGCATGAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATGTTGTTGGGAAGCGTGAAGGGAACAAGATTAATGAATTGGGAATACTTGCAAATCTACACCAAACAATTTGGATTGAGAAATTGGAGAATGTGGTCAATAGCAGCGAAGCATTGGAGGCAAGAATGTTTGAAAAGGATGGCATTGAATCTTTGATCTTGATGTGGTCGCCAGATGAATACGAGAATATAGTTGATTCCCAAATTGAAAGAGATATACTTGAAGAGTTACGACCTCATAGTAATTTGAAAAAACTAGAAATTTGTGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTGTTCTTACCGCAACATCACCCAAATAACACTGGGCGATCTTCTTTCGGGTTATTTCAAGAATTGTTGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTGGATATTGCAAAGTTTGAAAGGCTTCCTATTGTGGGGGATGAGTTTTACCGAAATGATGAATCTTGTGTGGAGACTCCATTTCCAATGCTTGAAACTCTTACATTTCAGTCAATGCCATGCTGGGAGGAATGGCGTTCATTGGAGTTCAATGCATTTCCTCGACTTAGGAAGCTTATCATATGGGATTGTCCCATGTTGAGAGGAGATTTGCCAAATCAACTACCATCTTTGGAAGATCTTACTATTCACAATTGCGAGCAGCTCAGCAGTTGTGTTCCAAGAGCTTCTGGGATTACCTGTTTACGCATAGAAGGAAACAAAGAAGTGAGAATTGGGGAGCTACCTCCTTTGCTGGATAAGCTATCAATTACTGGAAAGCATCAAGCGGAGTCGGTGATGGAGGCCATTGCGCACACCCAACTCACTTGCCTCAGATCTTTAATCATCTCAAATTGTTCATCCCACGTATTGTTTGCAGTTAGTAGTATTCCCGCATCACTACAAGAGCTGACAATATCGAATTGCAAAAAATTAGAATTCGAAATGGAAGGCCAACACCACTCATTGCATTATCTAACGATACGTAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGYSTGTTSAWATCAGGGAGTGTGAAAAGATGGAGTMTCTCGTGGTGTCACGCTCTCTTTCATCTCTCCGTTCTTTACATATACATGATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGATGGCATCACCTCAGCTAGAATATCTCTCATTACGTGGTTGCCCAGAGATTGATTTGTCTGCTATAGGGGATCCACAGCGTAGCTTGAGATCTCTTAGCATCAGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAGTTTGATGGGCTTACTCATCTTTATATTAAAGGTGAAAATGAGAGTGTGAAGTGTCTCCCTAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCACACTGGATGGCATTAAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCATCTCCCTCCAACAATTATCTATTTATGAATGTTACAATTTGGAGAACATTGACGGAGAAAAGCTGCCTGCCTCTCTGTTACGACTCAGCATCTCTGAAAGCCCTTTGGGTAAACGGTGTGAGATGAAGGACCCGCAGGTTTGGCCCAAAATTTCCCACATCCCCGCCATTCAAGTTGRTKRMAGATGGATTTGGTAA 3675 0.4103 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTHKLIERLKTNLCAVRAFLIDAEQKQIKERAVKDWLDSLKDAMYVADDLLDEVFTKAATQKDPGTFLSRFSGILNLQDRDVANRMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDVCGREEDKEAILKLLLDDDSDDDTGGQSDVSVIPIVGMGGIGKTTLAQLVYQDDKVKENFDFQAWICVSEEFDVFKVTKTIIEAITKSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWDKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKYARLSTCSMENPTLKKVGKDLVKKCDGLPLAAQALGGLLRGNSDIKYWNHLLKSEIWELSDDKIKVVPALRISYYYLPSYLRECFVFCSLYPKDYEFSKDELILLWMAENFLQPAGKKTPEEVGDEYFDELIARSFFQPSKIRENKFVMHDLVHDLAMIFGGEFYFRAEELENAVEVDIKTRHLSHNAKGNYPISKLLGVCDRVKHTRTFLEINLEREIPFNMENAPCILLSKLKYLRALSFKCFPLESLPDSIGELIHLRYLDLSWTDIMTLPDTLCNLYNLQTLKLFGCWKLNALPVGMKDLTNLRYLDITHTGLHEMPEGMSKLTSLQVLSNYVVGKREGNKINELGILANLHQTIWIEKLENVVNSSEALEARMFEKDGIESLILMWSPDEYENIVDSQIERDILEELRPHSNLKKLEICGYRGTTFPDWLGHCSYRNITQITLGDLLSGYFKNCCMLPSLGQLPSLKHLDIAKFERLPIVGDEFYRNDESCVETPFPMLETLTFQSMPCWEEWRSLEFNAFPRLRKLIIWDCPMLRGDLPNQLPSLEDLTIHNCEQLSSCVPRASGITCLRIEGNKEVRIGELPPLLDKLSITGKHQAESVMEAIAHTQLTCLRSLIISNCSSHVLFAVSSIPASLQELTISNCKKLEFEMEGQHHSLHYLTIRNSCDSVTSFSLDSFPNLVXVXIRECEKMEXLVVSRSLSSLRSLHIHDCGSLKSLQTLWMASPQLEYLSLRGCPEIDLSAIGDPQRSLRSLSISYCEKQLSCVASQFDGLTHLYIKGENESVKCLPKEGWLPATLESLTLDGIKSVEMLECKGLAHLISLQQLSIYECYNLENIDGEKLPASLLRLSISESPLGKRCEMKDPQVWPKISHIPAIQVXXRWIW* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3049 1224 Gene3D - 143 316 IPR027417 -
Amo10g3049 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 422 IPR027417 -
Amo10g3049 1224 PRINTS Disease resistance protein signature 262 276 - -
Amo10g3049 1224 PRINTS Disease resistance protein signature 800 816 - -
Amo10g3049 1224 PRINTS Disease resistance protein signature 359 373 - -
Amo10g3049 1224 PRINTS Disease resistance protein signature 189 204 - -
Amo10g3049 1224 Pfam NB-ARC domain 184 388 IPR002182 GO:0043531
Amo10g3049 1224 SUPERFAMILY L domain-like 909 1211 - -
Amo10g3049 1224 Pfam Rx N-terminal domain 6 95 IPR041118 -
Amo10g3049 1224 Gene3D Ribonuclease Inhibitor 534 938 IPR032675 -
Amo10g3049 1224 Gene3D - 322 406 IPR042197 -
Amo10g3049 1224 SMART LRR_typ_2 1054 1074 IPR003591 -
Amo10g3049 1224 SMART LRR_typ_2 591 614 IPR003591 -
Amo10g3049 1224 SMART LRR_typ_2 638 661 IPR003591 -
Amo10g3049 1224 Gene3D Ribonuclease Inhibitor 989 1081 IPR032675 -
Amo10g3049 1224 Gene3D Ribonuclease Inhibitor 1082 1198 IPR032675 -
Amo10g3049 1224 PANTHER DISEASE RESISTANCE PROTEIN RP 46 966 IPR044974 GO:0006952
Amo10g3049 1224 CDD RX-CC_like 34 127 IPR038005 -
Amo10g3049 1224 Gene3D - 407 492 IPR036388 -
Amo10g3049 1224 Gene3D - 23 126 - -
Amo10g3049 1224 PANTHER - 46 966 - -
Amo10g3049 1224 SUPERFAMILY L domain-like 482 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3049 Amo-Chr10 96210148 96215224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3049 186 672 WRKY Transcription Factor Family AT5G45050 21.847 5.61e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3049 - - adu:107472405 1597.02