Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3046 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTCGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCAGAACCTGATTGAAAGGTTGAAGACTAATCTCTATGCTGTTCAAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGAACTGGCTTGATAGTCTCAAAAATGCCATGTATCTTGCTGATGACTTGCTCGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTGGTTTCTCTAGTGTTCTTAATTTGCAAGATCGGGATGTAGCAAAGAGGATGGAGGAAGTCATTAATAGGATAGAGTCTCTTGTGAATCAAAAAGACACTCTTGGTCTGAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAGAAGACAAGGAGGCCATAGTAAAACTGTTGTTGGATGATGATGGTGATGATACAGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCBCAATTGGTTTACCAGGATGGCAAAGTAAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTAAAAGTTTTTGCAGCTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAGAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTATGATGATTGGAATAAACTTCTAAAACCATTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACAACTAGAAGTAAAAGAGCGGCTTCTGTGGTGCAAACTGTTTCACCTTATGAACTAAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCAAAACACGCATGTCTCTCAACTGGTTCTATGGAGAATCCAACCTTAAAAAAAGTCGGCAAAGATCTCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGTGGAAATTCTGATATCAAGTATTGGAATTATTTGTTGAAGAGTGAGATCTGGGAACTCTCTGATGATAAGATAAAGGTTATTCCTGCGTTAAGAATCAGTTATTACTATCTTCCTTCGTATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTAGCAAAGACGACTTGATATTACTATGGATGGCAGAGAATTTTTTGCAACCAACAGGAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTGACTGCGAGATCATTTTTCCAACCTCATAAGAATCGTGAAAACAAGTTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATATTTGGTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTGGAGGTTGATATTAAAACTCGCCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGGACTCAATTTGAATTCACAGATTGCTTTTAACATGGAAAATGCACCATGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCATTTAATTGGTTTCCTCTTGAGTCATTGCCTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATTTGTCTTGGACCTACATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAAACATTGAAGCTGGTTGGATGTCGGAAACTAAAAGCCCTTCCTGTTAGCATGAAAGATCTTACAAACTTGCGTTACCTTGATATTAGCGGGACTGGTTTGSATRAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAASMAAGTATGTTGTCGGGAAGCRTGAAGGGAACAAGATTAATGAATTGGGAGCACTTGCAAATCTACACCAAACAATTTTCATTGACAAATTGGAAAATGTGGTCAATAGCAGCGAAGCATTGGAGGCAAGAATGTTTGAGAAGGATGGCATTGAATGTTTGCTCTTGGAGTGGTCGCCAGATGAATATGAGAATACAGTTGATTCTCAAACTGAAAGAGATATACTTGAAAAGTTACAACCTCATAGTAATTTGAAAGAACTAGAAATTTGGGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTGTTCTTACCACAACATCACCCAAATAACACTGGGCGGTATATTTTCGGGTTATTTGAAGAATTGTTGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTGGAAATTTCAATGTTTGAAAGGCTGGCTATTGTGGGGGCTGAGTTTTACCGAAATGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGAAACTCTTACATTTCAGTCAATGTCTTGCTGGGAGGAATGGCGTTCGGTGGAGTTCAATGCATTTCCTCGACTTAGGAAGCTTTTCATATGGGATTGTCCGGTGTTGAGTCGAGATTTGCCAAATCAACTACCATCTATGAAAGATCTTACTATTGGGAAGTGCGAGCAGCTCAGTTGTTGTGTTCCAAGAGCTCCTGCGATTACCTGTTTATGCATAGAAGGGAGCAATGAAGTGAGAATTGGGGAGCTACCTCCTTTGCTGCATAAGCTTTCAATTAAAGGAAACCATCAAGCGGAGTCGGTGATGGAGGCCATTGCGCACACCCAACTCACTTGCCTACGATTTTTATCCGTCTCAGGCTGTTCATCCCGCGTATTGTTTCCAGTCAGTAGTATTCCTGCAGCACTACAAGATCTGACGATATCGAATTGCAAAAAATTAGAATTCCAAATGGAAGGCCAACACCACTCATTGCATACACTAAGGATACATAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTCCGTGTTGAAATCAGCAAGTGTGAAAAGATGGAGTCTCTCGTGGTGTCACGCTCTCTTTCATCTCTCCGTTATTTAGAGATAAAGAATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGGTGGCATCACCTCAGCTAGAATATCTCTCATTACTTGGTTGCCCAGATATAGATTTGTGTGCTACAGGGGATCCACACCGTAGCTTGAGAGATCATAGCATCATCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAATTTCATGGGCTTACTCATCTTTCTATTGGAGGTGAATGTGAGAGTGTGAAGGCTCTCCCAAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTATCTCAGACTGGATAGCATTGAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCAACTCCCTGCAAGAATTGTCTATTTATGGATGTTACAATTTGGAGAACATTAACGGAGAAAAGCTGCCTGCCTCTCTATTACGACTCGTCATCTTTGGAAGCCCTTTGGGTAAACGGTGTGAGATGAAGGACCCGCAGGTTTGGCCCAAAATTTCCCACATCCCCGCCATTAAAGTTGATTACAGATGGATTTGGTAA 3672 0.4112 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQNLIERLKTNLYAVQAFLIDAEQKQIKERAVKNWLDSLKNAMYLADDLLDEVFTKAATQKDPGTFFSGFSSVLNLQDRDVAKRMEEVINRIESLVNQKDTLGLREIPKENMSWRITTSLVETSDVCGREEDKEAIVKLLLDDDGDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDVFKVTKTIIEAITKSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYDDWNKLLKPFQKGVKGSKILITTRSKRAASVVQTVSPYELSLLSEEDCWLVFSKHACLSTGSMENPTLKKVGKDLVKKCDGLPLAAQALGGLLRGNSDIKYWNYLLKSEIWELSDDKIKVIPALRISYYYLPSYLKECFVYCSLYPKDYEFSKDDLILLWMAENFLQPTGKKTPEEVGDEYFDELTARSFFQPHKNRENKFVMHDLVHDLAMIFGGEFYFRAEELENAVEVDIKTRHLSHNAKGNYPISKLLGVCDRVKHTRTFLGLNLNSQIAFNMENAPCILLSKLKYLRALSFNWFPLESLPDSIGELIHLRYLDLSWTYIMTLPDTLCNLYNLQTLKLVGCRKLKALPVSMKDLTNLRYLDISGTGLXXMPEGMSKLTSLQVLXKYVVGKXEGNKINELGALANLHQTIFIDKLENVVNSSEALEARMFEKDGIECLLLEWSPDEYENTVDSQTERDILEKLQPHSNLKELEIWGYRGTTFPDWLGHCSYHNITQITLGGIFSGYLKNCCMLPSLGQLPSLKHLEISMFERLAIVGAEFYRNDESCLETPFPMLETLTFQSMSCWEEWRSVEFNAFPRLRKLFIWDCPVLSRDLPNQLPSMKDLTIGKCEQLSCCVPRAPAITCLCIEGSNEVRIGELPPLLHKLSIKGNHQAESVMEAIAHTQLTCLRFLSVSGCSSRVLFPVSSIPAALQDLTISNCKKLEFQMEGQHHSLHTLRIHNSCDSVTSFSLDSFPNLVRVEISKCEKMESLVVSRSLSSLRYLEIKNCGSLKSLQTLWVASPQLEYLSLLGCPDIDLCATGDPHRSLRDHSIIYCEKQLSCVASQFHGLTHLSIGGECESVKALPKEGWLPATLEYLRLDSIESVEMLECKGLAHLNSLQELSIYGCYNLENINGEKLPASLLRLVIFGSPLGKRCEMKDPQVWPKISHIPAIKVDYRWIW* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3046 1223 Gene3D Ribonuclease Inhibitor 1085 1189 IPR032675 -
Amo10g3046 1223 Gene3D Ribonuclease Inhibitor 908 1082 IPR032675 -
Amo10g3046 1223 PRINTS Disease resistance protein signature 188 203 - -
Amo10g3046 1223 PRINTS Disease resistance protein signature 358 372 - -
Amo10g3046 1223 PRINTS Disease resistance protein signature 261 275 - -
Amo10g3046 1223 PRINTS Disease resistance protein signature 635 651 - -
Amo10g3046 1223 PANTHER OS05G0414200 PROTEIN 30 988 - -
Amo10g3046 1223 PANTHER DISEASE RESISTANCE PROTEIN RP 30 988 IPR044974 GO:0006952
Amo10g3046 1223 SUPERFAMILY L domain-like 903 1210 - -
Amo10g3046 1223 Pfam Rx N-terminal domain 6 94 IPR041118 -
Amo10g3046 1223 Gene3D Ribonuclease Inhibitor 533 907 IPR032675 -
Amo10g3046 1223 SUPERFAMILY L domain-like 481 900 - -
Amo10g3046 1223 Gene3D - 143 315 IPR027417 -
Amo10g3046 1223 CDD RX-CC_like 37 127 IPR038005 -
Amo10g3046 1223 Gene3D - 321 405 IPR042197 -
Amo10g3046 1223 Gene3D - 24 142 - -
Amo10g3046 1223 Gene3D - 406 491 IPR036388 -
Amo10g3046 1223 Pfam NB-ARC domain 183 386 IPR002182 GO:0043531
Amo10g3046 1223 SMART LRR_typ_2 637 660 IPR003591 -
Amo10g3046 1223 SMART LRR_typ_2 1053 1074 IPR003591 -
Amo10g3046 1223 SMART LRR_typ_2 590 613 IPR003591 -
Amo10g3046 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3046 Amo-Chr10 96159721 96164177 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3046 185 655 WRKY Transcription Factor Family AT5G45050 22.558 1.82e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3046 - - adu:107472405 1620.91