Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3040 ATGCAGTCGTTCGWWGCAAAGGGGTTTTCGCTGATYGAAATGGTGACGCTGGTGGGAGGAGGACACTCAGTTGGAGTGGCGCATTGTAGCATGTTTCGCGAGAGGCTTTCGAGCTTTCGAGGAGGAAGRGTTGATCCCACCATGGATCCTYATTTGGATGCAAGGTTGGTGWAGTTATGTGGATCGTCGAACCGGCCGGCCACGAACGATCCGACCGTGTTTTTGGACCTAAACACGCCGTTTGCGTTTGATAATAGATTTTYTAATCAAATTCTTGAGAGGAGAGGCATACTTCACTTCGATCAGCAGCTWGCTATGGACGAATCATCCAGAGACATGGTTTCGCGTTTTGCGACGGATGGTGATATCTTGTTTCAGAATTTTGCAAATGCWATGATAAAATTGTCTGCTGTTAATGTTTGGCTTGATAATGAAGGAGAGATTCGAAGGAATTGCAGGGCTTTTAATTAA 471 0.4522 MQSFXAKGFSLIEMVTLVGGGHSVGVAHCSMFRERLSSFRGGRVDPTMDPXLDARLVXLCGSSNRPATNDPTVFLDLNTPFAFDNRFXNQILERRGILHFDQQLAMDESSRDMVSRFATDGDILFQNFANAMIKLSAVNVWLDNEGEIRRNCRAFN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3040 156 SUPERFAMILY Heme-dependent peroxidases 2 156 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 Gene3D Peroxidase, domain 2 2 135 - -
Amo10g3040 156 Pfam Peroxidase 2 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 PANTHER PEROXIDASE 25-RELATED 1 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 ProSiteProfiles Plant heme peroxidase family profile. 1 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 Gene3D - 136 156 - -
Amo10g3040 156 PRINTS Plant peroxidase signature 13 25 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 PRINTS Plant peroxidase signature 90 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 PRINTS Plant peroxidase signature 74 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 PRINTS Plant peroxidase signature 130 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g3040 156 PANTHER PEROXIDASE 44-RELATED 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3040 Amo-Chr10 96102500 96103510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3040 1 156 Peroxidase AT4G26010 44.872 2.19e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3040 K00430 - gmx:100816459 183.726