Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3037 ATGGCAAAAGAGCATGAAAAGCAGCCAATTAAAGTACCAAATGGTGAATTGAACAAATGTACTTCCGAAGATCTACTATGTGAGCACAAGGGTACTGCTGTGCCTTATTTTGCACTTGGATTGTGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGATGGTGGCTTGGATCCTCCTGCTTTCCAGCGTGCTGAGAGGGAGAGAAGGGTAAAATCAGATTCTGAGGAAAGTGCCAATAGAACAGATGATATGGTGAAAGCATCAAATGGTGAACATGGAAGCCAAAAAGAGGGATTACATGCCTCAGAGCCAAAAAGTGTTGGAGATAACTATGAGCACACAGCCACTCAAGATGGCAACCTTGATGAATCACATGAAGATGATACGAAGACTAAAACTCATGATGAATCAGAAAGTTTATCTGATATTGATGATCTAGAGGTTGATAGCTACCTTCACAATGAGGAGGAAAAACATTACAAGAAGATTATATGGGAAAATATGAATCGAGAATATCTTGAGGAACAAGCAGCTAAGGAAGCAGCTGCTGCAGCTGCTAAGAAATTTGCCGAGGCAAATTGTTCCGAAGAGGAGCTAGCAGCAAGAGAATTTGCGAAATCAGCTGCTGATGCTGTGGCAAAGTCCAGAAAGGAAATGAGACAAAAACGAGCTCAAGAGGCCAAAAATTCTGGTCCTGCTCAATCTGCTATAGAGGCCACCCGGCAGATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGRTTAGAAAAGCTATTTGGTGATCCTGTATCTACAGAAAATCCCAAGAAAGTACGATTTGATCCATCTTTGGACAACGATGAAAATAKAGAATCCAAATTAGAGGYAAAACTAAAGGATGATGATGCAGTAGGAYTAGAAGATGAAGTTGAGGATGGTGACATGACTGGAGAATATGAAGATAATATGTATCAGGAAAATGGAGATGAGGCATATGAGGATGAATATTATGACGATGGTGATTATTGA 1029 0.4033 MAKEHEKQPIKVPNGELNKCTSEDLLCEHKGTAVPYFALGLCETCYKDFDKLSGGLDGGLDPPAFQRAERERRVKSDSEESANRTDDMVKASNGEHGSQKEGLHASEPKSVGDNYEHTATQDGNLDESHEDDTKTKTHDESESLSDIDDLEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKFAEANCSEEELAAREFAKSAADAVAKSRKEMRQKRAQEAKNSGPAQSAIEATRQMLRTKRLSSKVNYDRLEKLFGDPVSTENPKKVRFDPSLDNDENXESKLEXKLKDDDAVGLEDEVEDGDMTGEYEDNMYQENGDEAYEDEYYDDGDY* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3037 342 MobiDBLite consensus disorder prediction 49 153 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 274 304 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 231 247 - -
Amo10g3037 342 Pfam Brf1-like TBP-binding domain 145 266 IPR011665 -
Amo10g3037 342 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 48 270 IPR029529 GO:0000126|GO:0000995|GO:0006383
Amo10g3037 342 MobiDBLite consensus disorder prediction 218 247 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 305 342 - -
Amo10g3037 342 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 48 270 IPR000812 GO:0006352|GO:0070897
Amo10g3037 342 Gene3D Single helix bin 136 187 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 266 342 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 120 143 - -
Amo10g3037 342 MobiDBLite consensus disorder prediction 64 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3037 Amo-Chr10 96082046 96086179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3037 27 251 Inorganic Solute Cotransporters AT2G01280 35.556 1.13e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3037 K15196 - ccaj:109793056 305.834