Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3036 ATGAAGATAGCACTTGAGCGGAATTTTACCCGGGGACGTAAATCAGAGCAAGTGCAGGCTGCTTGTCTTTATATTGCATTCCGGGAAAATAATAAGCCATACCTTCTCATTGATTTTTCAAATTATTTAAGGATAAATGTTTACGTTCTAGGTGCAGTTTTTTTACAGCTGTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAGAAGCCTGTTGATCCCAGTCTTTTTATTTATAAATACACAAATAATTTGTTAAAGGAAAGGAACTTGGTTGTCTCTGAAACCGCGCTGAGTATTATTGCTAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAGCCAAGCGGATTATGTGGTGCAGCATTATATATGTCTGCTCTTGCAAATGGTTTTAAGTGCTCTAAGTCAGACATTCTAAGAATCGTCCATATATGTGAAGCAACTTTGACTAAGCGGTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGAACAATTGA 507 0.3866 MKIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKERNLVVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALANGFKCSKSDILRIVHICEATLTKRLVEFENTESASLNN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3036 168 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 167 IPR000812 GO:0006352|GO:0070897
Amo10g3036 168 Pfam Transcription factor TFIIB repeat 2 58 IPR013150 GO:0017025
Amo10g3036 168 Pfam Transcription factor TFIIB repeat 70 160 IPR013150 GO:0017025
Amo10g3036 168 CDD CYCLIN 1 45 IPR013763 -
Amo10g3036 168 Gene3D - 1 66 - -
Amo10g3036 168 SUPERFAMILY Cyclin-like 73 162 IPR036915 -
Amo10g3036 168 SUPERFAMILY Cyclin-like 2 64 IPR036915 -
Amo10g3036 168 Gene3D - 74 165 - -
Amo10g3036 168 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 2 167 IPR029529 GO:0000126|GO:0000995|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3036 Amo-Chr10 96078489 96082032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3036 4 166 Inorganic Solute Cotransporters AT2G01280 51.807 4.69e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3036 K15196 - gmx:100817609 285.034