Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3030 ATGGGTCACTACACTTTGTTGTTGAACACTTGTTTTCTTATAGTGGTGTGTGCCTTCATGGTTGTTCATTTGCAACTTCCTGAAGTTGTCGATYTGGACAACCARACCGACAACTCTTTCTCTAACATAACAACCGACCAAGATTGCAACAGTTTGCACAACCATGYCGACTACAAACACAAGTGTCTGTACCTCAAATCCAACGATCCATGCGTGTCTCAGGGCTACATCGATTACCTTTTCTTCTTCTATTGCAAGCTTGGGAGGTTCCCTCTTTTAGGTTACACTCTATTGATACTTTGGCTCCTTGTTTTGTTTTACATGTTGGCAAACACSACRTGTCAGTATTTTTGTCCTTCACTTGAAAARCTTTCAAAGTTTCTRAGGTTGTCGCCAACAATTGCTGGGGTGACTCTTCTCTCCCTTGGCAATGGTGCCAGTGATGTCTTCTCAAGCCTTGTTTCTTTCCAAGGSAGTGGGACCCAAAGCATTGGCTTCAACACTGTTCTTGGTGGGGTTTCTTTTGTCACTTGTGTTGTTGTGGGCCTAGTTAGCATTTCAATACGTAACAAGAGTGTTGGGGTTATCAAATCTGCGTTTGTGAGYGARGTTTGCTTTCTCTTTCTCGTTCTTTTGTTCTTGTTTAGCATCTTGATCAGTGGTGAGATCAATGTTCTTGGTGCAGTTGGGTTTCTGATGAGTGTGACTTGGAGTTACATTTCAGCTCAAGAATTGGTAGGGTTGCTAGTTTCAATTGGATACATTTGTGGAATTAGTCCTTCAATTCTAGGGTTAACGGTTCTTGCTTGGGGGAATTCACTTGGGGATTTAATGACGAATTTAACCCTGGCTATAAATGGTGGATCTGAGGGTGCTCAAATTGCAATTTCAGGTTGCTATGCTGGCCCAATATTCAATACTCTTGTTGGGTTGGGGTTGTCTCTTGTGACTTGCACTTGGTCACAGTACCCACAAAGTGTTGTGATAACTAAGGATTTATATCTATGGGAGACAATGGGGTTTTTGGTCATTGGATTGATTTGGGCACTTGTGGTTTTGATTAGAAAAGATATGAAATTTAATGGACTTTTGGGAGTGGGGCTTTTGGTAATTTACTTCGTTTCTCTATTTCTCAGGCTAGTTCAGAGTAAAGGGTCTCTAGATCTAGACCAATTCTAG 1179 0.4114 MGHYTLLLNTCFLIVVCAFMVVHLQLPEVVDLDNQTDNSFSNITTDQDCNSLHNHXDYKHKCLYLKSNDPCVSQGYIDYLFFFYCKLGRFPLLGYTLLILWLLVLFYMLANTTCQYFCPSLEKLSKFLRLSPTIAGVTLLSLGNGASDVFSSLVSFQGSGTQSIGFNTVLGGVSFVTCVVVGLVSISIRNKSVGVIKSAFVSEVCFLFLVLLFLFSILISGEINVLGAVGFLMSVTWSYISAQELVGLLVSIGYICGISPSILGLTVLAWGNSLGDLMTNLTLAINGGSEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSQYPQSVVITKDLYLWETMGFLVIGLIWALVVLIRKDMKFNGLLGVGLLVIYFVSLFLRLVQSKGSLDLDQF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3030 392 PANTHER CATION CALCIUM EXCHANGER 229 387 - -
Amo10g3030 392 PANTHER CATION CALCIUM EXCHANGER 3 232 - -
Amo10g3030 392 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 3 232 - -
Amo10g3030 392 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 229 387 - -
Amo10g3030 392 Pfam Sodium/calcium exchanger protein 228 380 IPR004837 GO:0016021|GO:0055085
Amo10g3030 392 Pfam Sodium/calcium exchanger protein 99 228 IPR004837 GO:0016021|GO:0055085
Amo10g3030 392 Gene3D - 130 381 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3030 Amo-Chr10 96028034 96029740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3030 228 386 Antiporters AT5G17850 64.780 7.95e-64 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3030 K13754 - gmx:100813848 288.885