Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3029 ATGTTGTGGGTGGACAAGTACCGGCCTAAAACTCTCGACCAGGTTATGGTCCATGGCGACATTGCACAAAATCTCAAGAAATTGGTTACAGAACAGGATTGCCCCCATTTGCTCTTCTATGGATCACCTGGTTCTGGCAAGAAAACTCTAATAATGGCTCTTCTCCGCCAAATGTTTGGWCCTGGTGCTGAAAAGGTGAAGGTGGAAAACAGGACCTGGAAAGTGGATGCTGGTAGTAGATCGATTGATCTTGAGCTGACAACGCTATCAAGTGTCAACCACATTGAAATGAGTCCAAGTGATGCAGGTTTTCAGGATAGATACATTGTTCAAGAAATAATCAAAGAAATGGCTAAGAATAGACCCATTGAAACCAAAGGGAAGAAAGGATTTAAAGTACTGGTGCTCAATGATGTGGACAAACTCTCTAGAGAAGCACAACATTCTCTCCGCCGAACCATGGAAAAGTACAGTGCTTATTGCAGATTGATTCTATGTTGCAATAGTTCTTCAAGAGTCACAGAAGCTATCCGCTCTCGTTGTCTGAATGTGCGAATAAATGCACCAAGTGAAGATAAGATTGTTGAAGTTTGGATTCATTGGTAA 606 0.4208 MLWVDKYRPKTLDQVMVHGDIAQNLKKLVTEQDCPHLLFYGSPGSGKKTLIMALLRQMFGPGAEKVKVENRTWKVDAGSRSIDLELTTLSSVNHIEMSPSDAGFQDRYIVQEIIKEMAKNRPIETKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEDKIVEVWIHW* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3029 201 PANTHER REPLICATION FACTOR C SUBUNIT 3 2 197 - -
Amo10g3029 201 Gene3D - 1 189 IPR027417 -
Amo10g3029 201 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 2 197 - -
Amo10g3029 201 Pfam DNA polymerase III, delta subunit 20 188 - -
Amo10g3029 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 197 IPR027417 -
Amo10g3029 201 SMART AAA_5 33 192 IPR003593 -
Amo10g3029 201 CDD AAA 35 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3029 Amo-Chr10 96016605 96019922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3029 1 197 Core DNA Replication Machinery Family AT5G27740 84.772 3.20e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3029 K10756 - gmx:100818329 377.096