Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3026 ATGGCTTCCTCTATTTCCTCTGATATCCGTTTTTTCAAGATTGGTCTCAGAAAAAGCCTTGAAGATGGAAACCTTAAGTTACCAAAGAAGTTCAGTAAGAAATATGGTGATGGTGTTCCAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTGCATGGAAGATAGATTGGTCTTTGTATGATGGTGTGATTCAATTTGAAAATGGTTGGAACGAATTTGCTTCATATTACCTTTGGATAATGGCATCTGCTGTTTGGTACAATGAAACTTCTAACATTAAGTACAATTTTGACATCATTATGGCTTGA 309 0.3689 MASSISSDIRFFKIGLRKSLEDGNLKLPKKFSKKYGDGVPNPVYLKPPDGTAWKIDWSLYDGVIQFENGWNEFASYYLWIMASAVWYNETSNIKYNFDIIMA* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3026 102 SUPERFAMILY DNA-binding pseudobarrel domain 5 75 IPR015300 -
Amo10g3026 102 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 77 - -
Amo10g3026 102 Gene3D - 4 97 IPR015300 -
Amo10g3026 102 PANTHER B3 DOMAIN-CONTAINING 6 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3026 Amo-Chr10 95971691 95972823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3026 11 77 B3 DNA Binding Superfamily AT3G18990 32.836 3.08e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3026 - - adu:107471775 171.4