Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3016 ATGGATCCCTCTCGCCGAGCACCGCGCTCAGCGATCGACCCCGTCCCGAAGTTCCGCCAAGTCGGGTTCTTCACTCCTGGAGCCCCGCCCGAACGCTCTCAATCGGGTCCACCCGACCCGACCCACTCTACTCCCGTTTCCGACGTCTCACAATCCGCCAACTCGCTCTCTCCGGTCATGATCCCTCCGCCGCGCCACCTCTCCGACAATCTCGTCATCCACGCCCGCCCCACGCTTGCGTCCCCTCTCCGCGCAGATTCCCTCGCCGGTGGCGGAGTTAGCAGCTTCGGCGATTTCTTCCCCGCTCCGATGTCGCCGGCGACTCCAGCTTCTTCTTCGTACTCCAGCAGGATGGCCGCCGGCGAAGGGAGCTTCTTTGAGCGCCATGGTGGCGGAGGCGATAAGGGGAACAATGCCGGCAAAGTGGCGTCGTCATTTCCCCGCGGAGGATTCGACCTGACGGCGATGAAGAAGGTTAGTGGCATTGGCGGTGGCGGTGGCGGTGGTAGTGGCGTTGGTGTTCCGGCAAGTGAGCTGACCACCGTGTCCGTGGTGAATGATTCGCTAGCGATTCATGAAAAAGAGAAAGCAAACAGAGGAGGAGGGTCAGCTGTGGAAGTAAAAGACCAATCTACTGGTTCAAAACAACAAAAACCAAAGACCACAAAAGCTGAAAGGCGAGCTCTTCAAGAATCTCAACGTGCCGCAAAGGCTGCTGCAAAAGCTGAAGGCAACAAGGCATCTGGAGCTGCAACTTCAGTGAATGCAAAACCAGCCAAAGCTGCCAAGCCCACACCAAAAGTTGATAATGCTGCAGTTGCAGCATCTGAGAAGAAGGGTGGTGATTGTCCTCCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGAATGCAATATGATGACAAGAGTCGAGTGGAGAAAGCTAAGCGACGAGCTGTGGTGAAACAAACTGAAGCTAGGAACAGAGTMGAGTTGTTCAGGCATTTACCACAATATGAACACGGAAGTCAGCTTCCAGATCTTGAGTCAAAGTTTTTTCATCTGGATCCTGTACATCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGCGATATATGTGGTGCTAATGCTCGTTGTATTGCAATGTTTCAAGCATTTCAAGAAGCCATAAAAGACTATAGAGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAGGTAGTTATGTTTCATTTCTAAATGAGTGTAGGCCTATTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCCTGTCTGAGTCAGAAGCCAAAGTTTCTCTCCAGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTGTACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGATCATCATCGGCAGTTGAAATGATACTGTTACATGCACATGAATTGGGAAAACAGTTTCGTGTTGTTGTAGTTGATTCTCGTCCAAAGCTTAGAGGACAGCTTTTACTTCGGAGGCTTCTGGAGAAGGGTCTTAGCTGTGAATACACTCATATAAATGCTGTTTCATACATAATGCATGAAGTTACCCGAGTTTTTCTGGGTGCTTCGTCAGTGTTGTCTAATGGAACGGTATSTTCAAGGGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCGTTCCGSGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAKAGGGTACAGCTGGATTCGATATGCTCAAATGAACTTGGTGATCCAGATATAATTTCAAATGTTCGGGGTAGAGAGGATGTCAAKTACTTGGATGGTTGGGCCAATGTTGAAAATCTACAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTGCCCCCCACAAGTGTTCCTGTAATTGTAAGAGAATATGGGAGAGAGCAGGTCTGGATTTAA 2034 0.4784 MDPSRRAPRSAIDPVPKFRQVGFFTPGAPPERSQSGPPDPTHSTPVSDVSQSANSLSPVMIPPPRHLSDNLVIHARPTLASPLRADSLAGGGVSSFGDFFPAPMSPATPASSSYSSRMAAGEGSFFERHGGGGDKGNNAGKVASSFPRGGFDLTAMKKVSGIGGGGGGGSGVGVPASELTTVSVVNDSLAIHEKEKANRGGGSAVEVKDQSTGSKQQKPKTTKAERRALQESQRAAKAAAKAEGNKASGAATSVNAKPAKAAKPTPKVDNAAVAASEKKGGDCPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLESKFFHLDPVHPAVYKVGLQYLSGDICGANARCIAMFQAFQEAIKDYRVPPEKTLVRDLTAKIGSYVSFLNECRPISISMGNAIRFLKSRIAKLPLTLSESEAKVSLQSDIERFISEKIVLANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLLEKGLSCEYTHINAVSYIMHEVTRVFLGASSVLSNGTVXSRVGTACVAMVAHAFRVPVIVCCEAYKFHXRVQLDSICSNELGDPDIISNVRGREDVXYLDGWANVENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3016 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 677 - -
Amo10g3016 677 Gene3D - 463 670 IPR042529 -
Amo10g3016 677 MobiDBLite consensus disorder prediction 123 147 - -
Amo10g3016 677 MobiDBLite consensus disorder prediction 187 301 - -
Amo10g3016 677 MobiDBLite consensus disorder prediction 156 175 - -
Amo10g3016 677 MobiDBLite consensus disorder prediction 37 58 - -
Amo10g3016 677 SUPERFAMILY NagB/RpiA/CoA transferase-like 328 670 IPR037171 -
Amo10g3016 677 MobiDBLite consensus disorder prediction 1 66 - -
Amo10g3016 677 MobiDBLite consensus disorder prediction 280 301 - -
Amo10g3016 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 677 - -
Amo10g3016 677 Pfam Initiation factor 2 subunit family 369 660 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3016 Amo-Chr10 95783291 95789247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3016 4 677 Eukaryotic Initiation Factors Gene Family AT5G38640 63.743 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3016 K03680 - gmx:100775998 1021.54