Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3003 ATGAGGATGAGTTGTAACGGATGCAGAGTGTTGAGGAAAGGGTGCAGCGAGGATTGTACCATAAGACCGTGTTTGGATTGGATCAAGAGCGCAGAGTCTCAAGCCAATGCTACTCTCTTCCTTGCTAAGTTCTATGGCCGCGCTGGTCTCATCAACCTCATCAACGCTGGCCCCAATCACCTTCGTCCTGCGGTTTTTCGTTCGTTATTATACGAGGCATGCGGGAGAATAGTGAACCCGATTTATGGATCGGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTCTGCCAAGCCGCCGTCGAAGCGGTTTTGAAGGGACTGCCGATCACGCCGATAAATTCGGAGCTGGCGGAGAGCGGACGGGGTCCACCTTTCAAGGCTCATGACATACGCCACGTGTCCAAGCCTCATAACAACACCGTAACCGTCGCGTCTCACGAAACTAAGCGAGTCAAGACTCGCTCCCGAATCAAGAAGCCCAAGGTGGCCGAGGTTGCGAAGCGCGCGTCGAGTCACGAGTCATCGCTGAGCCACGAACGGATGGAGGCGGTTGCTACGGCGGCGGAAGGAGAGAGCAAGGAGATCGAAAGTGACGTGTCGGTGGAGACGACTACGACTACGGTTCGGTTCCATGACGAACCGGATTCTGATGCAAAGGGGAGTGGTGGTTCGGCCGAAGTCTGCGGGAACGAGGTTGGGTTGGAGCTGACGCTGGGGTTTGAAACGGTGTCACGTGAGCATCATGACGTTGTGGTGCCAATGAAGAAGAGGAGAATTGATTTGAAGGATTTTTGTGGCGGGGTAAGTAGTGATAACGGTTCGTGCAAGATGGAGTTGGGACTTCAGTTCCAGGCTTTCAACGGTTCAGTTTTGACTTGA 879 0.5415 MRMSCNGCRVLRKGCSEDCTIRPCLDWIKSAESQANATLFLAKFYGRAGLINLINAGPNHLRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGLPITPINSELAESGRGPPFKAHDIRHVSKPHNNTVTVASHETKRVKTRSRIKKPKVAEVAKRASSHESSLSHERMEAVATAAEGESKEIESDVSVETTTTTVRFHDEPDSDAKGSGGSAEVCGNEVGLELTLGFETVSREHHDVVVPMKKRRIDLKDFCGGVSSDNGSCKMELGLQFQAFNGSVLT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3003 292 MobiDBLite consensus disorder prediction 158 180 - -
Amo10g3003 292 PIRSF AS2 139 282 IPR017414 -
Amo10g3003 292 PIRSF AS2 1 153 IPR017414 -
Amo10g3003 292 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Amo10g3003 292 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 282 - -
Amo10g3003 292 MobiDBLite consensus disorder prediction 144 180 - -
Amo10g3003 292 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 282 - -
Amo10g3003 292 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3003 Amo-Chr10 95637531 95638487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3003 1 281 AS2 family AT3G02550 57.241 1.43e-101 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo10g3003 LOB 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3003 - - aprc:113867933 353.984