Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2945 ATGATGATACTAATTCATAAATCACACACTATGATTGCATCATTTGTTTCAACACTACTACTACTTATTGTGGGAGTAGTGAATTCATATCCAGAAGGTGATAAGATAAGCAGTTTGCCAGGCCAGCCACGTGTCACATTTCAGCAATATGCTGGCTACATTACTGTCGATGACAACCATGATAGAGCTTTGTTTTATTATTTTGTTGAAGCTGAATCAAACCCTGCTTCCAAGCCACTAGTTCTTTGGTTGAATGGAGGGCCTGGTTGTTCTTCGGTTGGAGTTGGAGCTTTTGTTGAGAATGGTCCTTTCAGACCCGGTGACAACAATATTCTTCTAAAAAATGATTATAGTTGGAATAAAGAGGCAAACATGCTATATTTGGAATCACCAGCTGGAGTTGGTTTCTCATACTCTAGCAATAAATCTTTCTATGACTTGGTTACAGATGAGATAACAGCAAGGGATAACCTTATATTCTTAGAGCGCTGGTTTGCTAAATTTCCTGAGTATGCAAAAAACGAGTTCTTCATTACTGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCATTTCTTGTTATTCAATCCAACGCCACCTTCAATGTTAATCTTAAGGGAATAGCGTTAGGGAATCCTCTACTGGATTTTAATGTTGACCTGAATTCGGAAGCGGATTATTTATGGTCTCATGGGCTAATATCTGATTCGACATACGAACTATACAATACGATATGCAACTCTTCTCAATATATGAGAGAATCTATAGATGGAAAGATTAGTGGTGATTGTGCAAGAGTAAATAATGCATCGTCCACCGAGATATCCGATTATGTTGATCAATATGATGTCACTCTTGATGTTTGTTTGTCACCAGCCAAACAACAAGTTTATATGCTCACAAATCAAATGCATGCTACACAAAATATAGATGTTTGTGTGGGAGATAAATTAGTGGTATACTTAAATAGGAAAGATGTGCAACAAGCACTCCATGCTAGACTTGTTGGAGTTACCAAATGGTCAACTTGCAGCACGGTTCTGAATTATGACTATCATAATCTAGAAATACCAACACTTCCTCTTCTAGGTACATTTGTTGAGTTGGGTATTCGGGTTCTCGTATACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGATCAAGATTTCTGGTGAATGCATTAGCCAAAGAAATTGGACTCAATACAACAGTGCCCTATGGAGTCTGGTTTCAGGGAAAACAGGTAGCGGGATGGACACAAGAATATGGCAAGATATTATCATATGCGACGATTAGAGGAGCATCTCATGAAGCTCCATTCTCTCAACCAGCCAGATCGTTAGTGCTACTTCAAGCATTTCTTCAAGGAAAACCACTTTCCAATAATATATGA 1401 0.3862 MMILIHKSHTMIASFVSTLLLLIVGVVNSYPEGDKISSLPGQPRVTFQQYAGYITVDDNHDRALFYYFVEAESNPASKPLVLWLNGGPGCSSVGVGAFVENGPFRPGDNNILLKNDYSWNKEANMLYLESPAGVGFSYSSNKSFYDLVTDEITARDNLIFLERWFAKFPEYAKNEFFITGESYAGHYVPQLAFLVIQSNATFNVNLKGIALGNPLLDFNVDLNSEADYLWSHGLISDSTYELYNTICNSSQYMRESIDGKISGDCARVNNASSTEISDYVDQYDVTLDVCLSPAKQQVYMLTNQMHATQNIDVCVGDKLVVYLNRKDVQQALHARLVGVTKWSTCSTVLNYDYHNLEIPTLPLLGTFVELGIRVLVYSGDQDSVIPLIGSRFLVNALAKEIGLNTTVPYGVWFQGKQVAGWTQEYGKILSYATIRGASHEAPFSQPARSLVLLQAFLQGKPLSNNI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2945 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 Pfam Serine carboxypeptidase 41 459 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Amo10g2945 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Amo10g2945 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 462 IPR001563 GO:0004185|GO:0006508
Amo10g2945 466 Gene3D alpha/beta hydrolase 32 465 IPR029058 -
Amo10g2945 466 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Amo10g2945 466 PANTHER CARBOXYPEPTIDASE 10 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2945 Amo-Chr10 94879176 94882938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2945 322 462 Calmodulin-binding Proteins AT2G22960 31.206 2.63e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2945 K16297 - gmx:100799900 682.559