Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2944 ATGTCATCGCGATTCCTTTCCTGCTTTCGGCCATCCCACACTTTCCGTAATTGTCCTCCACCACCGGCGCCACCAGGCCCCTCCAACCCCAACCTGACCACGTACCTGTACCACACCGACATGGGCCTCGTGACTCTAACATGGTCACGCTCTAACTTAGGCCGCTCCCTCCACGTCCACGTCCACAACCACAACCCCTTCGATTCCCCTCCTCCTTATAAAGCCCTTCATATTCTAGAAGAAGCACGGATCCAAAACCCTCTCTTCCACCACGCGACTCTTCTGGAACCTCTCCAAGGCCAATCCAAGGCTTTCCACGCTAACAACCTCCACTCCCTACTCCTCAAGAAGGAACACGTCTTTCCCGACACCGTTTACTCCACCACCGTCATTTTCGGCGGAAAGACCCGTCGTATTCAAATTGACTGTGGCTCCTCCAGGGATAATGACTCTCCCTCAAATTGTTACCTTGTTGCTGAATTAAATATCAGATTGATAAAATTTGTGTGTGTATTGATTGTATTGGAGGCAAGAGCTGGGTTCTATGAAAAGCCAATTACTACAATAGATTTTGCATCACTATATCCATCTATTATGGTGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAATTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAAGGGATAACTTGAACGCTTAA 756 0.4683 MSSRFLSCFRPSHTFRNCPPPPAPPGPSNPNLTTYLYHTDMGLVTLTWSRSNLGRSLHVHVHNHNPFDSPPPYKALHILEEARIQNPLFHHATLLEPLQGQSKAFHANNLHSLLLKKEHVFPDTVYSTTVIFGGKTRRIQIDCGSSRDNDSPSNCYLVAELNIRLIKFVCVLIVLEARAGFYEKPITTIDFASLYPSIMVAYNLCYCTLVTPEDVRKFNLPPESVNKTPSGETFVKSNLQKASIGRDNLNA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2944 251 PANTHER OS08G0422401 PROTEIN 2 70 - -
Amo10g2944 251 SUPERFAMILY DNA/RNA polymerases 174 237 IPR043502 -
Amo10g2944 251 Pfam DNA polymerase family B 174 242 IPR006134 GO:0000166|GO:0003677
Amo10g2944 251 PANTHER EXPRESSED PROTEIN 2 70 IPR008586 -
Amo10g2944 251 PANTHER EXPRESSED PROTEIN 102 147 IPR008586 -
Amo10g2944 251 Gene3D Palm domain of DNA polymerase 174 249 IPR023211 -
Amo10g2944 251 PANTHER OS08G0422401 PROTEIN 102 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2944 Amo-Chr10 94864550 94866480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2944 174 242 Core DNA Replication Machinery Family AT5G63960 85.507 2.71e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2944 K02327 - aip:107619773 153.295