Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2939 ATGTGGAGGTCTAGTTTGAACTTTGCTTTGTTAATTTTTCTAGTTCATGCAGTTGTGCTTCAAGCTCTGGATCAATCAGGGTTCATCAGCATAGATTGCGGAGCCTTGCCCAACTCTACTGATTGGAAAGATATACAATATATTTCAGATGCCGGTATCATTAGCAGTGGTGTAGCTAAATCAGTGAGTTCTGACTCCATACGTTACTTAAAACACAAACAACTGTGGACTCTGAGAAGCTTCCCGGAAGGAAGAAGAAACTGTTACAAGATAAACAACATCACAATAGGCTCCAAATATCTGATCCGCCTTGAGTTTGCGTACGGAAACTACGACGGGATTAAAACTTTTCCAGAGTTTGACGTGTATCTTGGAGTTAACAAGTGGGATACAGTTGGAGCATCCAACCTTAGCCCCGGCGGGTACAAGACCGATGAGATTATACATATAGCTTCACAGGAATACATAAATATCTGTTTGGTGAATACAGGCCATGGCACACCATTTATATCAACCATAGATTTGAGGCCTTTGAAAAATGATACCTATTCCATCACTCCTCCATCTGCTGTTGGATCACTGGTTAACTACTACCGTGACGATTTTGGTTATTCATTCAGCGACGACTACATCAGATATGGGGATGATCCCTTTGATCGTCAATGGAGAACCTTCATGCAACCTGATTGGGTAAAATTGTTTGATTCAAGTATTATAACTGCTGGTGCCTTTAGCAAGAATGATTACCAGTTGCCAGCAGGTGTCATGAATACCGCGATCACACCGGCAAATGCAAGTGATCCATTAGTGATAAAGTGGAGGCCAAAAATTCCAATAAGTGATGTATACTATATATACATGCATTTTGTGGAGGTTGAGGCTGAGTCGAACAACAACGAAATAAGGGAATTTAACATCTTTGTGGGCGGTAGGCTATTCTCTGAAAAACCCGTGCAGCCGCCCTACCTCTCCACAAAAACAATCAGAGCCGTAGTCCCGAACTTGGTTGATATTTCACTCGAAAAAACGCCGCTTGATGCCATCACAAGGATCCAGTCTGTCTATGGTTTGGCAATAAGAGAAGAGTGGCAAGGGGATCCATGCGGTCCCGCAGGCTACATGTGGGAGTGGGACGGTCTCAATTGTACTCGTCGTCTAAATGAATCTCCTAGGATTACTGCCTTGGATTTATCAAACAACAACTTAAATGGCCAAGTTCCAGATTTTCTCTCTCAATTACACAACTTAAAGATATTGAATTTGGCGGGCAATAACCTCAGTGGTTCAGTACCATCAATACTAGTTGAGAAATCTAACAAAGGTTTTTTGTTACTCAATGTTGATCAAAATCCATATCTACTATGTGAATCTGGAGGATGCAAAGAAAAGAAGAAAAAGAAAACAATGCCATTATCAATAGCCGTAGCTATTGGGATTTCAGTAGCTCTAGTGGCTGTAGCCGCCGCAGCTCTAGTCTGGACCCTGAAAAAGAAAAAAACCAAAGTAGAAATGACTCCAAAGGAGATCAAGCAAGAGGATGATGTATCACTCCAGTTCAAGAATAAAATCTATTCATACTCTGATATCATTAAAATCACCAACAACTTCAGAAAAATTCTTGGGAAAGGTGGGTTTGGAACAGTTTATATGGGACATGTTGATGACGCTCCAGTTGCAGTGAAGATGCTTTCTCAATCCTCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAGGTTCTAATGAGAGTTCATCATAGAAATTTGACCTCCCTAGTTGGATATTGTAATGAAGGAAGCAATAAGGCTCTCATATACGAATATATGGCTAATGGAAATCTACGTCAACATCTCTCATCAGTAGGCACCAAATTCCTGAGCTGGAAAGACAGGCTCTGTATAGCCGTAGATGCAGCCCAAGGGTTGGAATATTTACACAATGGTTGCAAGCCACCTATAATCCACAGAGACGTAAAAGCTACAAACATTTTGTTGACTGAAAACTTGCACGCTAAATTATCTGATTTCGGTTTGTCAAAAAGTATCCCAACGGATGGGAGCAGTCATGTTTCAACTGTTGTTGCCGGCACCGCTGGCTACTTGGACCCCAATTACTACCAATCAAGCAGATTAACAGAGAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTTTTGGAGTTAATCACAAGTCAAGCAGCAATAAGAATGGCAAAAGATGATGATGATGATAATGATGGAAAAACTCATCACTTAAGTCATTGGGTTAGTTCGAAGGTGGAGAGAGGGGATATCCATGGCATTGTTGACTCGAGGTTAGGAGAAGACTTTGACTGTAGCTCTGCCTGGAAAATTGTGGAAACAGCACTGACTTGTGTGTCTCAAAACTCTAATGAAAGGCCAATCATGAGTGAGGTGTTGATTGAACTCAAGAACGCTTTGGCCATGGAATTAAGTCGAACAAACTATGGTGATGGTATCAACAATAATAATGGAGATTCATCGGTTGAACTGGTCTTTGTGAATGCAAATGAATCCACTCCTCTGGCCAGGTAA 2553 0.4117 MWRSSLNFALLIFLVHAVVLQALDQSGFISIDCGALPNSTDWKDIQYISDAGIISSGVAKSVSSDSIRYLKHKQLWTLRSFPEGRRNCYKINNITIGSKYLIRLEFAYGNYDGIKTFPEFDVYLGVNKWDTVGASNLSPGGYKTDEIIHIASQEYINICLVNTGHGTPFISTIDLRPLKNDTYSITPPSAVGSLVNYYRDDFGYSFSDDYIRYGDDPFDRQWRTFMQPDWVKLFDSSIITAGAFSKNDYQLPAGVMNTAITPANASDPLVIKWRPKIPISDVYYIYMHFVEVEAESNNNEIREFNIFVGGRLFSEKPVQPPYLSTKTIRAVVPNLVDISLEKTPLDAITRIQSVYGLAIREEWQGDPCGPAGYMWEWDGLNCTRRLNESPRITALDLSNNNLNGQVPDFLSQLHNLKILNLAGNNLSGSVPSILVEKSNKGFLLLNVDQNPYLLCESGGCKEKKKKKTMPLSIAVAIGISVALVAVAAAALVWTLKKKKTKVEMTPKEIKQEDDVSLQFKNKIYSYSDIIKITNNFRKILGKGGFGTVYMGHVDDAPVAVKMLSQSSVQGYQQFQAEVKVLMRVHHRNLTSLVGYCNEGSNKALIYEYMANGNLRQHLSSVGTKFLSWKDRLCIAVDAAQGLEYLHNGCKPPIIHRDVKATNILLTENLHAKLSDFGLSKSIPTDGSSHVSTVVAGTAGYLDPNYYQSSRLTEKSDVYSFGVVLLELITSQAAIRMAKDDDDDNDGKTHHLSHWVSSKVERGDIHGIVDSRLGEDFDCSSAWKIVETALTCVSQNSNERPIMSEVLIELKNALAMELSRTNYGDGINNNNGDSSVELVFVNANESTPLAR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2939 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Amo10g2939 850 SMART serkin_6 534 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2939 850 SUPERFAMILY L domain-like 365 436 - -
Amo10g2939 850 Pfam Malectin-like domain 31 341 IPR024788 -
Amo10g2939 850 SUPERFAMILY Protein kinase-like (PK-like) 516 808 IPR011009 -
Amo10g2939 850 ProSiteProfiles Protein kinase domain profile. 534 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2939 850 Pfam Protein tyrosine and serine/threonine kinase 536 805 IPR001245 GO:0004672|GO:0006468
Amo10g2939 850 Gene3D Ribonuclease Inhibitor 352 451 IPR032675 -
Amo10g2939 850 PANTHER OS07G0107800 PROTEIN-RELATED 334 850 - -
Amo10g2939 850 PANTHER OS07G0107800 PROTEIN-RELATED 12 328 - -
Amo10g2939 850 Gene3D Transferase(Phosphotransferase) domain 1 609 828 - -
Amo10g2939 850 PANTHER PUTATIVE-RELATED 334 850 - -
Amo10g2939 850 PANTHER PUTATIVE-RELATED 12 328 - -
Amo10g2939 850 CDD STKc_IRAK 540 811 - -
Amo10g2939 850 ProSitePatterns Protein kinases ATP-binding region signature. 540 561 IPR017441 GO:0005524
Amo10g2939 850 Gene3D Phosphorylase Kinase; domain 1 516 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2939 Amo-Chr10 94807274 94812339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2939 1 850 Receptor kinase-like Gene Family AT1G51850 41.730 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo10g2939 Malectin_like 1.4e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2939 - - adu:107492765 1190.25