Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2924 ATGTCTTTTTCCTCTTGGGCCTCACCTGACACAAGATTGTTCATCAATGGGATTCTCATTCTCCCTTCAACTCTTCAATTCTTCTTCTTTCTCATTTTGAAACAACTCACTTTACTTTTGAGATCAATGGGGTTCTCAAGAACTGCAGAATCTGCACTTCTTCTTGTGGCATTCTTCTGTCTTCTGAGATCTGCACATGCTTTACTTTCTCCCAAAGGAATCAACTTTGAAGTGCAAGCTTTAATGGCCATAAAAGCTTCTCTAGTGGACCCTCATGGCATTTTGGACAATTGGGATGGAGATGCAGTTGATCCATGTAGCTGGAACATGGTCACATGTTCTCCTCAGAGCTTTGTCATTAGCTTAGGAATTCCAAGTCAGAATTTATCTGGTACTCTATCACCAAGCATTGGAAACCTAACAAACCTTCAGAGTGTTGTGCTGCAAAATAATAACATAACTGGACCAATCCCTTCAGAGCTAGGCAAACTTTCCATGCTTCAAACACTTGATCTCTCTAATAACTTCTTTAATGGGGAAATTCCTCAATCTCTTGGTCATCTCAGAACACTTCAGTACTTGAGGCTTAATAATAACAGTTTTTCTGGGGAATGTCCTGTGTCAGTGGCTAACATGGCTCAGCTTTCTTTTCTTGACTTGTCCTACAATAATCTAAGTGGATCTGTACCAAGAATTTTGGCCAAATCATTCAGCATTGTTGGAAACCCCCTTGTATGCACAACAGGAAAAGAAACAAACTGCCATGGAATGACACTGATGCCTATGTCCATGGACTTAAACACTACTCAGAGCGCTTCACCATCAGGCACACATAAAACTCACAAAATCGCCATCGCTTTCGGCTTAAGTCTTGGATGCCTCTCCTTTATAGCTCTTGTCTTTGGACTTGTTATATGGTGGAGGCGCAAGCACAACAAGCAGGCATTCTTTGATGTCAAAGACCGGCACCATGAAGAAGTGTACCTTGGAAACCTGAAGAGGTTCCAATTAAGAGAACTTCAGATTGCTACAAACAACTTCAGCAACAAGAACATACTGGGAAAGGGTGGTTTTGGAAATGTGTACAAAGGAAGACTTCAAGATGGGAGTGTTGTAGCTGTGAAGAGGCTGAAAGATGGGAATGCAATTGGAGGGGAGATTCAGTTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAACCTCCTTAAACTTTATGGATTTTGTGTTACACCAACAGAAAGGCTTTTGGTTTATCCCTACATGTGCAATGGGAGTGTTGCTTCACGTCTGAAAGGAAAGCCAACATTGGAGTGGGGAACAAGGAAGCAAATAGCATTAGGAGCAGGAAGAGGACTGCTGTACCTTCATGAGCAGTGTGATCCAAAAATAATCCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTATTGTGAAGCAGTTGTTGGTGATTTTGGGTTGGCAAAGCTTTTGGATCACAAAGACACACATGTCACAACTGCTGTCAGGGGTACTGTGGGCCACATTGCACCTGAATATCTCTCCACAGGCCAGTCCTCTGACAAAACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAATTGATCACTGGCTTGAGGGCTTTGGAGTTTGGCAAGGCTGCTAACCAAAAAGGTGCTATGCTTGATTGGGTGAACAAGGATCTAAAGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTAAAGGTAGCTCTATTGTGCACACAATATCTTCCGGCCCACAGGCCCAAGATGTCTGAGGTTGTGCGCATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCCTCACTAAGTGCCCATGACACAACAAAGCCCAACAAAGCCCATGAGTTCTCTTATTCAGATCGTTACTCTGATCTCACTGATGACTCTTCTTTGTTGGCCCAAGCTATGGAGCTTTCTGGCCCAAGATGA 1971 0.4307 MSFSSWASPDTRLFINGILILPSTLQFFFFLILKQLTLLLRSMGFSRTAESALLLVAFFCLLRSAHALLSPKGINFEVQALMAIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPQSFVISLGIPSQNLSGTLSPSIGNLTNLQSVVLQNNNITGPIPSELGKLSMLQTLDLSNNFFNGEIPQSLGHLRTLQYLRLNNNSFSGECPVSVANMAQLSFLDLSYNNLSGSVPRILAKSFSIVGNPLVCTTGKETNCHGMTLMPMSMDLNTTQSASPSGTHKTHKIAIAFGLSLGCLSFIALVFGLVIWWRRKHNKQAFFDVKDRHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGRLQDGSVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTPTERLLVYPYMCNGSVASRLKGKPTLEWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHKDTHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVNKDLKNNYDRIELEEIVKVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASLSAHDTTKPNKAHEFSYSDRYSDLTDDSSLLAQAMELSGPR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2924 656 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Amo10g2924 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Amo10g2924 656 Gene3D Ribonuclease Inhibitor 74 256 IPR032675 -
Amo10g2924 656 Pfam Leucine rich repeat N-terminal domain 77 114 IPR013210 -
Amo10g2924 656 SUPERFAMILY Protein kinase-like (PK-like) 332 634 IPR011009 -
Amo10g2924 656 ProSiteProfiles Protein kinase domain profile. 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2924 656 Pfam Protein tyrosine and serine/threonine kinase 350 603 IPR001245 GO:0004672|GO:0006468
Amo10g2924 656 Gene3D Phosphorylase Kinase; domain 1 316 423 - -
Amo10g2924 656 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 48 656 - -
Amo10g2924 656 Gene3D Transferase(Phosphotransferase) domain 1 424 622 - -
Amo10g2924 656 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Amo10g2924 656 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 48 656 - -
Amo10g2924 656 SMART serkin_6 347 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2924 656 SUPERFAMILY L domain-like 77 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2924 Amo-Chr10 94573359 94577649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2924 49 656 Receptor kinase-like Gene Family AT5G16000 72.727 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo10g2924 PK_Tyr_Ser-Thr 8.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2924 - - gmx:100806650 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3521 20 145463505 145467795 Amo10g2924 10 94573359 94577649 hybridization
Amo10g2924 10 94573359 94577649 Amo14g3891 14 144404614 144408627 PCT
Amo14g3891 14 144404614 144408627 Amo10g2924 10 94573359 94577649 PCT