Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2908 ATGCCTTACCTTGTCCGCGAGAATCTCTTCATCGGAAACATCAGCGACGCGGCGGAGATCCTCCAGAACGGTGGAGTGGCGGTGTGCCGGAGGAGGAGACTTCACACACATACTCTCCGTCCTCAGCTCCGCCTCCATTTCTTCTTCTCCGAATGGCGCCCATCCGTCTCCATCCCCGTAAAGGAGATCAACAAGGTCTACTGTGCCTTGTCGCCGGAGAAGCTCCTCTACTCTCTCGAGTACGCCGGACGTGACCTCAAGCTTGTGAGGATGGCGGTGCCTCTGAAGGACACGGAGAACGAGGACTTGCTTGATTACCTCGAAGTTTGCATCGACTTCATTGATCGTAGCAGGAAGGAAGGTTCCGTTTTGGTTCACTGCTTCGCCGGAGTTTCTAGAAGTGCGGCAGTGATTACGGCGTACTTGATGAGAATGGAAAATCTCTCTCTCGAAGGTGTGATACTTCCCTTTTTAGAATGCTCAACTTTAATTACAAGCTATTTTGAAAGCTTCTGTTACTGCCACTGTGAATATTCATCAGTTCTATGTAAATATGAATCCCTTGAATCATTAAGGAAGAGCTATGAATTTGTTTGCCCCAATGATGGCTTTCTTGAGCAGTTGAGAATGTTCGAGGAGATGGGCTTCAAGGTTGATCACTCCAGTCCTATATATAAGCGCTTTCGTCTGAAAATACTTGGTGAGAGTCATTTCTCGGGTCAGAATAGACAGTTCAAACTGGGTGCAGACCCTGGCATGCCTGTCCAAATTTCTTCAGATGTTGAAGGAGCTACTAAAGTAGAAATAATAGGAGTCCTACATATCGCTGTAAGAAGTGCCGACGAATTGTGCATTGCAAGAACATGTTGTGATCACATTCCTGGTGAGGGTGAGACGTCCTTTGAGTGGCATAAGCGAAGAAGTGGCAATCCTTTCAACAAGTCTAATGAATCGTGTTCGTCCATATTTATTGAGCCTCTCCGGTGGATGAAAGCTGTTGAGGAAGGCGCATTGGAGGGAAAACTGTCATGCGTTCATTGCGATGCCCGTTTGGGATACTTCAACTGGGCAGGCATACAGTGCAGCTGCGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAGGCCGTGTAGATATAAGCCCTGTATGA 1152 0.4774 MPYLVRENLFIGNISDAAEILQNGGVAVCRRRRLHTHTLRPQLRLHFFFSEWRPSVSIPVKEINKVYCALSPEKLLYSLEYAGRDLKLVRMAVPLKDTENEDLLDYLEVCIDFIDRSRKEGSVLVHCFAGVSRSAAVITAYLMRMENLSLEGVILPFLECSTLITSYFESFCYCHCEYSSVLCKYESLESLRKSYEFVCPNDGFLEQLRMFEEMGFKVDHSSPIYKRFRLKILGESHFSGQNRQFKLGADPGMPVQISSDVEGATKVEIIGVLHIAVRSADELCIARTCCDHIPGEGETSFEWHKRRSGNPFNKSNESCSSIFIEPLRWMKAVEEGALEGKLSCVHCDARLGYFNWAGIQCSCGSWITPAFQLHKGRVDISPV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2908 383 PIRSF DUSP12 165 383 IPR016278 GO:0006470|GO:0008138
Amo10g2908 383 PIRSF DUSP12 5 155 IPR016278 GO:0006470|GO:0008138
Amo10g2908 383 ProSitePatterns Tyrosine specific protein phosphatases active site. 125 135 IPR016130 GO:0016311|GO:0016791
Amo10g2908 383 Gene3D Protein tyrosine phosphatase superfamily 5 234 IPR029021 -
Amo10g2908 383 Pfam Dual specificity phosphatase, catalytic domain 89 152 IPR000340 GO:0008138|GO:0016311
Amo10g2908 383 SMART dsp_5 1 181 IPR020422 GO:0006470|GO:0008138
Amo10g2908 383 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 215 IPR029021 -
Amo10g2908 383 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 379 - -
Amo10g2908 383 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 104 154 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2908 Amo-Chr10 94393505 94395615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2908 88 213 Protein tyrosine phosphatase (PTP) family AT3G06110 26.772 3.42e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2908 K14819 - gmx:100804683 472.241