Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2892 ATGCCCGGCCCCGGCATTATCGCCGCCGAGTGCGCACCGCAGGCGGCCGAGGCGCCGTCTGACCTCGCATTCGATGATTTCTCCTCCCAATTCGACGGATTACCCATCCCCTCCATGGACGCGCTTTTCGTCGAAAATGGTGTTGGCACACTGAATACTCACGCCTTCGCTTCCGATCTCGAATTTCCCATGGATTTTGGCGACGGCGGTGACTATGAAATCACCTTCGACGACCTCGATAACCTTTACATCCCCTCCGATGCCGACGATTTTCTCCTCCCCGACGCATGCAACCCTAATGGCGACCTGATTTTGCCGACGAACGATGATCTCGGCGATTGTTCTGGTAAGAATTCCGATTGCGACGCCGCTAATTCAGACTCGCCGGAATCAGGATCCTGTGCTGTTTATGGCGATCGGAGCTCCGGTGTTTCTAGGTTTTTGAATTCTCAGTCCTCCTCGGAGTCAGGCAGCTTCAAGCGCGAGCTTTCACCGAATCCTCGTGACTCTGCTGTTGTGAAAGACTCGAGCTTTCCGTCGCATGATTCTGATTCGTGCGGCGAAAGGGAAGAGTCGTCGAATGGTGCGATTTCTTCGCGGGGTTCGGGGAACGGTAGCGGGTCGGGTGTATACGAAACCATGAACTCTCCCTCACCTGATTGTTGCCGTTACGAGAGGGAAATTTCATCGACACACGCACATACAATTTTGGATCGGAACGTGAAATTGGAGGATAATGGAAAAGGTTGTGATCTGAAGAGAAAGCAAGATCAGAGTGAAGGGAGTGCTGAGACTAGAACAACCAAATTCAGAAGATCATCAGCGCCTGTGGAGAACAAGACCCAACAGAATGTGGTGGTTGATGACGACGACGAGAAGAGGAAGGCCAGATTGATGAGAAACAGGGAAAGTGCACAGCTTTCGAGGCAGAGGAAGAAGCACTATGTGGAAGAGCTTGAGGAGAAGGTGCGGTCAATGCATTCAACAATTGCTGATTTGAGTAGCAAGATTTCGTTTGTGATGGCTGAGAACGCCACTTTAAGGCAGCAATTGGGTGTTGGTGGGATGTGCCCTCCTCCCCCACCTGTTCCTGGGATGTATCCTCATGCTCCTCCCATGGCCCACATGCCTTATACATGGATGCCATGTGCTCCATATGTTGTTAAGCCTCAAGGATCTCAGGTTCCCTTGGTCCCCATTCCAAAGTTGAAGCCTCAGCAACCTGCTTCTTCATCAAAGAGTAAGAAGTCTGAGGGTAAGAAAAGTGAGGTGAAAACTAAGAAGGTTGCTAGCATTAGTTTGTTGGGTCTGTTTTTCTTTATACTGCTTTTTGGTGGGCTTGTTCCTATCGTGGATGTCAAGTTTGGTGGCTTAGTGGGGTATGTTCCTGGTAGGTCTAGCTATGTTACTGATAGGTTGTATAATCATCAAGGTGGAGGGAAGGTGTGGCCTGTGAATGGTCCTAGGAATGGATCTGAAAGAGACGAGGATATAGGGTATTCCAATGGGAGGTTTAGTATTTCCGACCACAGGGATTATGAGAGGGGTCGGAAACTAGGAGAGGAATCTCATGAACGGCAAGACCCACGATGCGATGAATTCGGCCATCGTGGCAATGCCAGTGAGCCCCTCCTTGCTTCGCTGTATGTCCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATACTGGCTGGTGAGAAAGCTATGGCTTCTCAGACTCATGAGGCAAAGAAGGAGAGTAAAGAAACTGGTTTGGTCATTACTAAGGATTGGGATTCTGCTTTGGCAATTCCTGAAGTTGGAAGAAATAGAGGTCAGCATCCTCATGTGTATACTGTTCCACCTGAGCAGAGGAAGGCTCTTGGTTCTGGTTCAACCAAAACTTTAAAGGACCACATGAAATCCTCTGCAAGTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGACCAATGTTAAGTTCAGGCATGTGCACAGAAGTCTTCCAGTTTGATGCCTCTCCAAAACCTGGCGCTATAGTTCCGGCAACATCAGTTGCCAATGTTTCTCGGGAGAGCCGCCAGAATGGTACAGCACTTAACAAGACCAGGAACAGAAGAATCCTCCATGGGCTCCCAGGTCACCTTGATGGAACCAGTCTGAACCTAACTGAAGACCATGTAAGGAATTCAGAGAGTGATCACTTCCATGGTAATAAATCTTCCATGGTGGTTTCAGTGCTTGTTGATCCCAAAGAGGCCGCAGATAGTGACGTCGACGGTGTGATGTCTCCAAAATCGATCTCTCGGATATTTGTGGTTGTGCTCATGGACAGTGTCAAGTATGTCACATACTCGTGTGGTCTTCCTCGTTTGTCTCCGCATCTAGTGACTGCTTGA 2403 0.4906 MPGPGIIAAECAPQAAEAPSDLAFDDFSSQFDGLPIPSMDALFVENGVGTLNTHAFASDLEFPMDFGDGGDYEITFDDLDNLYIPSDADDFLLPDACNPNGDLILPTNDDLGDCSGKNSDCDAANSDSPESGSCAVYGDRSSGVSRFLNSQSSSESGSFKRELSPNPRDSAVVKDSSFPSHDSDSCGEREESSNGAISSRGSGNGSGSGVYETMNSPSPDCCRYEREISSTHAHTILDRNVKLEDNGKGCDLKRKQDQSEGSAETRTTKFRRSSAPVENKTQQNVVVDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKISFVMAENATLRQQLGVGGMCPPPPPVPGMYPHAPPMAHMPYTWMPCAPYVVKPQGSQVPLVPIPKLKPQQPASSSKSKKSEGKKSEVKTKKVASISLLGLFFFILLFGGLVPIVDVKFGGLVGYVPGRSSYVTDRLYNHQGGGKVWPVNGPRNGSERDEDIGYSNGRFSISDHRDYERGRKLGEESHERQDPRCDEFGHRGNASEPLLASLYVPRNDKLVKIDGNLIIHSILAGEKAMASQTHEAKKESKETGLVITKDWDSALAIPEVGRNRGQHPHVYTVPPEQRKALGSGSTKTLKDHMKSSASDGKMQQWFREGLAGPMLSSGMCTEVFQFDASPKPGAIVPATSVANVSRESRQNGTALNKTRNRRILHGLPGHLDGTSLNLTEDHVRNSESDHFHGNKSSMVVSVLVDPKEAADSDVDGVMSPKSISRIFVVVLMDSVKYVTYSCGLPRLSPHLVTA* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2892 800 MobiDBLite consensus disorder prediction 146 163 - -
Amo10g2892 800 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 291 351 IPR004827 GO:0003700|GO:0006355
Amo10g2892 800 MobiDBLite consensus disorder prediction 245 273 - -
Amo10g2892 800 MobiDBLite consensus disorder prediction 397 423 - -
Amo10g2892 800 Gene3D - 291 353 - -
Amo10g2892 800 MobiDBLite consensus disorder prediction 146 218 - -
Amo10g2892 800 Pfam bZIP transcription factor 293 351 IPR004827 GO:0003700|GO:0006355
Amo10g2892 800 MobiDBLite consensus disorder prediction 511 536 - -
Amo10g2892 800 MobiDBLite consensus disorder prediction 622 646 - -
Amo10g2892 800 MobiDBLite consensus disorder prediction 245 282 - -
Amo10g2892 800 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 23 799 - -
Amo10g2892 800 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 23 799 - -
Amo10g2892 800 SMART brlzneu 289 353 IPR004827 GO:0003700|GO:0006355
Amo10g2892 800 MobiDBLite consensus disorder prediction 190 215 - -
Amo10g2892 800 CDD bZIP_HY5-like 294 345 - -
Amo10g2892 800 SUPERFAMILY Leucine zipper domain 293 351 IPR046347 GO:0003700|GO:0006355
Amo10g2892 800 Coils Coil 316 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2892 29 800 bZIP Transcription Factor Family AT2G40950 47.510 4.42e-174 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo10g2892 bZIP_1 2e-12 CL0018