LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo10g2890	ATGGCTGAAAATAAGCAACCAACAAACTTGAACGGAGCCTACTATGGCCCCGCCATCCCCCCGCGGCCGGCGGAACGAAGAAGAAGCTGCTGCTGCTGCCTCTTCAGCGTCATCTGGAAGCTTCTACTTGTGCTCATCATTCTCGCTGTCATCGCAGTCTTGGTATTCTGGGTGATTGTTCAACCGCGCATATTTAAGTTTTACGTGAACCATGCAGAGATAACACAATTCGACTACAACACCAACACCACCCAACTCCGCTACAACATGGTCCTCAACTTCACCGCCCACAACCCCAACAACAAACTCGGCATCTACTACGATCAAGTGCTGGCCAAAGCCTTCTACCAGGACACCCAGTTCGCCTCCGCCAACGTCATCACTTTCATGAACTCCTTCAGGCAAGACAAGAAGGGAACCAACCCTATGAGCGGTGTTTTCTCTGGTCAACAATTGATTTTCCTCGATTATAGCCAGTACTCGCAGGTCACTCATGATAAGAACCGTAGGAGTTTTGACATCTACGTCAAGCTCTACTTTCAGATCAGGTTCAGGCTTGGGGATCTCATTTATGGCACCTACAAGCCCAGAGTCAAGTGTGATCTCAACGTTCCATTTACAAACGCCACCAAAGCTTTCACTTTTTTTAAGACCACCAACATGGCTGATAATAAGCAACCAAACTTGAACGGAGCCTACTACGGACCAGCCATTCCGCCGGCTGAGCCGCCACGGCGCTACCGCCCTGACCGAAGCAGAAGAAGCTGCTTCTGCTGCCTATTCAGCGTCTTCTGGAAGATTCTTCTTGCGCTCATCGTGCTGGTCGTGATAGCAGGAGTCATATTCTACCTGGTGGTTCAGCCTCGCATATTCAAGTTCTACGTCAACGACGCAGAAATAACGCAATTCGATTACAACACCAACACCACCCAACTCCGCTACAACATGGTGCTCAATTTCACCGCCCACAACCCCAACAAGAAGCTCAGCATCTACTACGACAAGGTTTTAGCCAAAGCCTTCTTCATGGACACGCAATTCGGCAGCGCCGACGTCATCACTTTCATGAACTCCTTTAGGCAATACAAGAAGCAGAGCAACGCCATGAGCGGTGTTTTCTCCGGACAGCAGAACATTTTTCTTGATTATAGCCGCTACTCACAGATCAGCGATGACAAGAATAGTAGGTCTTTTGATATCTATGTGAAGCTCTACTTCAGGATGAGGTTTAGGCTGGGTGATTTGATTACTCGCACTTACAAGCCCAAAGTGAAATGTGACCTCAAGGTTCCATTCATCAATGGCACCAATGCTTTCACCTCCTTTACGCCCACCAAGTGCGATATTGATTTCTGA	1356	0.4853	MAENKQPTNLNGAYYGPAIPPRPAERRRSCCCCLFSVIWKLLLVLIILAVIAVLVFWVIVQPRIFKFYVNHAEITQFDYNTNTTQLRYNMVLNFTAHNPNNKLGIYYDQVLAKAFYQDTQFASANVITFMNSFRQDKKGTNPMSGVFSGQQLIFLDYSQYSQVTHDKNRRSFDIYVKLYFQIRFRLGDLIYGTYKPRVKCDLNVPFTNATKAFTFFKTTNMADNKQPNLNGAYYGPAIPPAEPPRRYRPDRSRRSCFCCLFSVFWKILLALIVLVVIAGVIFYLVVQPRIFKFYVNDAEITQFDYNTNTTQLRYNMVLNFTAHNPNKKLSIYYDKVLAKAFFMDTQFGSADVITFMNSFRQYKKQSNAMSGVFSGQQNIFLDYSRYSQISDDKNSRSFDIYVKLYFRMRFRLGDLITRTYKPKVKCDLKVPFINGTNAFTSFTPTKCDIDF*	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo10g2890	451	PANTHER	OS05G0367900 PROTEIN	19	222	IPR044839	GO:0098542
	Amo10g2890	451	PANTHER	OS05G0367900 PROTEIN	244	449	IPR044839	GO:0098542
	Amo10g2890	451	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	19	222	-	-
	Amo10g2890	451	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	244	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo10g2890	Amo-Chr10	94183592	94194547	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo10g2890	285	441	SNARE and Associated Proteins	AT1G32270	30.189	1.91e-15	75.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo10g2890	-		-	gmx:100795302	294.664