Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2880 GGAATTTTATTTGGAACATTATCTCTTTTAAAAGTGGTGCGGCAGTATAATAAGAATGCTACTGAGTTAAATGGTCTTGAGACTTGCACTATTGCTGGAAAGAAGAATGATAAGGCAGTTAATGAAGATCTTCTGAAGGATGAGATTGTTTCTGAACATCTAACTAGGAACATTCAGTTTTTTGGCTTTGAGTCTCAGCAGAAAGTGAGTGCATCATATGTTGTGGTCATTGGTCTTGGAGGGGTTGGCAGTCATGCTGCATCTATGCTCTTGAGATCAGGGGTCGGCAAGCTTCTTCTTGTGGACTTTGATCAGGTTTCTCTTTCATCATTAAATCGACACGCTGTTGCAACAAGAGCAGATGTTGGRATCCCAAAAGCGCAGTGCCTTAAGGAGCATTTCTCATCTATCTTTCCTGAGTGCCAAGTAGATGCAAAAGTACTGCTATATGATTCATCTACCGAAGAAGAAATTTTGTCAGGCCACCCTGACTTTGTCTTGGATTGTATTGATAACATTGATACTAAGGTGGCACTTCTTGCTGCTTGTGTACGGAGGGGCTTGAAGGTGTTATCTGCCACTGGGGCTGGTGCTAGAGCCGATCCAACTAGAATCCGCATTGCTGATTTAAGAGAGTCAACTAATGATCCATTGTCTCGATCTGTGAGACACCGTTTGAGGAAAGATCATGGCATTGAAGGTGGCATCCCGGTTGTATTTTCTTTAGAAAAACCCAAAGCTAAGTTGCTTCCATTTAAGGGTCCAAATGGTGAAGAGGAAAATCCTTCAGACTACCAGATAGTACCAGGCTTCAGGGTCCGTATCATACCGGTGTTAGGCACAATCCCTGCAATATTTGGACAAGTTATGGCATCCTATGTTGTGACGGAATTAGCAGGATTTCAAGTTCAAACAGAACCGATAGTCAATTTTGATACCGATCATTACCATACTCTCCATCAACGCCTTATTGAGCATGAGGAGTTAGTATATGGAACATCACAGCAAGTGCAGGTAGATGTTGAAGAAGTGATGTATATTGTAAAAGAATTATGGCATGGAAGAAGTGCTAGAGACCAGCTTGTGAAAGAAGTTGGACGAGGAATGTGGCGATCAGTTAATGAATTAATGCTTGTAAGGTGGGATTGCGAAAAGCCGGCTTCTATATCAAATTTAATTCTTTTGAAATTCAAAGAGGTTGATGAGCATGAATCTAGAACATTGGATGATATAAAGGAAAAGGAACCTGAATTCTACAACAGTGTAAATGCAGTGTTAAAACGAGCTGAAATTGACTTTGGCTACGCACATTAA 1314 0.4094 GILFGTLSLLKVVRQYNKNATELNGLETCTIAGKKNDKAVNEDLLKDEIVSEHLTRNIQFFGFESQQKVSASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFSSIFPECQVDAKVLLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRSVRHRLRKDHGIEGGIPVVFSLEKPKAKLLPFKGPNGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTELAGFQVQTEPIVNFDTDHYHTLHQRLIEHEELVYGTSQQVQVDVEEVMYIVKELWHGRSARDQLVKEVGRGMWRSVNELMLVRWDCEKPASISNLILLKFKEVDEHESRTLDDIKEKEPEFYNSVNAVLKRAEIDFGYAH* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2880 437 CDD YgdL_like 61 295 - -
Amo10g2880 437 Pfam ThiF family 55 317 IPR000594 -
Amo10g2880 437 Gene3D - 45 311 - -
Amo10g2880 437 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED 30 434 - -
Amo10g2880 437 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 53 312 IPR035985 GO:0008641
Amo10g2880 437 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 30 434 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2880 Amo-Chr10 94037362 94044029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2880 95 197 Sulfurtransferasese or Rhodanese AT5G55130 30.097 7.23e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2880 K22132 - gmx:100815445 749.199