Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2867 ATGAAAATACCACTAGGGGCGTGCGCGTCGTCAGATGGGGATGTGGTTGAATTGGAAGAAAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGACGATGAGTTTTACGCTGTTGATTCCGGCGAGTCGCTAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTCTCCGCTATAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGGTACCGATCCCCGAAGTTCTCCTTGATGCCTAACCGGAAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACAATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACAACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTRGCRTCTCCCRAATYCACWRSTTTATGGCGAGCCTAGCCGGCGGGTATCATAATTCTCAATACAGTTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGGAAGTGGAGGCTGATTTCGAGTGTGCAAATAGTGACCCTGTTATGACCACCAACCTGAAACAGTTGGAGCAGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTTACAGGGCCTGTTCAATGAGGGTGGTTGATTCTAAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATACGGCACTTCGGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATATGAGGGAGGTCCAATGCACGTGCATGATAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCAGTGCTTGTTCTTAACAATGTTCATGAGATCCCAAGGTCTCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGGCACAACACTGGTGCCTGATGGATTGGTACCAAAAAGTGTGCAAGATTTCATGTCACAGCACTGAAAAGTTCCAGTTTGCAAGAGAGATTGCCATGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGAGCCCCGGCGCGGAATCCACCCAGGCGCAATACAAAGGGTAACAGTGCTCATGGTGGAAAGAAAACCCAGCGATGTTGTTTGTGCCGGGAGGTGGGACACAACAGGACGAAGTGTCTGGACCACCGCACAATGGAGTCATCCAGCGCAGTTGCAGATGACATGGATTCGATGGACATTGACATGGTGGGTTGGTCGCTTTATAGATGA 1446 0.4993 MKIPLGACASSDGDVVELEESLDGAGGMSDNYADDEFYAVDSGESLGWIDFLNLSEEDVLRYNFADVDIAFEFYQQYAKHHGFGARRYRSPKFSLMPNRKKRPRAETRCGCPARMLLRMDNESGRWHVAYFSDAHNHNVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIXXSXIHXFMASLAGGYHNSQYSYTEFLRHFHRCLMFVRAKEVEADFECANSDPVMTTNLKQLEQSAAENYTRAIFYLFVPILYRACSMRVVDSKDNGSYFIHTVSRYGTSGKDWRVVATSDMREVQCTCMIMECFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVQSMGVIWDSVQLAQHWCLMDWYQKVCKISCHSTEKFQFAREIAMLMLKHFENEDAGDTSFPPEGPPTEGGRAPARNPPRRNTKGNSAHGGKKTQRCCLCREVGHNRTKCLDHRTMESSSAVADDMDSMDIDMVGWSLYR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2867 481 ProSiteProfiles Zinc finger SWIM-type profile. 284 320 IPR007527 GO:0008270
Amo10g2867 481 MobiDBLite consensus disorder prediction 395 431 - -
Amo10g2867 481 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 141 IPR031052 GO:0006355
Amo10g2867 481 Pfam FAR1 DNA-binding domain 98 140 IPR004330 -
Amo10g2867 481 PANTHER OS01G0607050 PROTEIN 179 396 - -
Amo10g2867 481 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 179 396 IPR031052 GO:0006355
Amo10g2867 481 PANTHER OS01G0607050 PROTEIN 63 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2867 Amo-Chr10 93811662 93813928 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g2867 FAR1 3.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2867 - - aip:107621349 589.726