Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo10g2860 | ATGGAGGTAGTGATGTTGGTTTGTTTCATTGGCATGGTTGGAATGGTGATGTGGGTGGTTTTTGTGTATGGAATTGAGTGGGTAAAGTCTCAAAGGGTTAGAAGGAAGCTAAGAATGCAAGGTATAAGTGGGCCACCACCTTCATTTCTTCATGGGAATCTGCTTGAAATGCACAGAATCAACACTGCATCACAAGCCAAAGTTGTTCATAGTAGTGATCATACTCATGACTTCACTGAATCTCTCTTCCCCTATTTTGAAATCTGGCGAAAACAATACGGTCTATTGTACACTTACTCAACAGGGATAAAACAAAACTTGTATATGAATAGTCCAGAATTAATATCAGAAATGAACAAGTTAATGACTCTGGATTTGGGTAAACCTTCTCATATAACAAACAACCTTGCATCCCTTCTTGGAAATGGCATTCTCAGAGCTAATGGACTTAGTTGGTCCCATCAAAGAAAACTTATTGCTCCTGAGTTCTACATGGAAAAAGTTAAGGGTATGGTGGACCTAATGATAGAGTCAACGCAACCATTATTAATAAAATGGGACAAAGCCATTGAGGCCAAATTAGGTAGTGATGATGATGATGGCAATGGCACAGTTGAAGTTGAAGTTGATGAAGATTTGAGGAGCTTAGCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCATATTCCAAAGGAATTGAAGTTTTCTCTAAGCTTAGGTTAATGCAAAAGAAGATGTCCAAACATGGTACCTTCCTTTTTGGAATCAAAGGTTTACGGGATACTCTAAACAATATATGGAGAGGGAAGGAAAATGAGATTAAAATTATGGAGAAGGAGGTAGAGTCACTAATTTGGGAGTTAGTGGAGGAACGAAAGCAAGAATGCTCAGACAAACCTTCTTCAAAGAAAGATCTAATGCATTTATTATTGGAAGCAGCTATGAGTGATGATGATTCAACATGTCTACCTAAAGATTTTGCCAAGCAATTCATCGTGGATAATTGCAAGAACATATACTTTGCTGGCCATGAAACCGTTGCAATAACTGCTTCTTGGTCTTTGATGCTTCTTGCTACTTATCCAGAGTGGCAAGATCGTGTAAGAAAAGAGGTTGCTCAAGTTTTCCCCAATGGCATACCAAATGTTGATTCTCTTCCTCTCTTGAAAACGGTCTATAAAGATACCCAAATTGGAAAACTACTTGTTCCCAAAGGTGTTGTTTTATGGACCCTAATTCCAACTATACATAGGGATCCTGAAATTTGGGGAGCAAATGCAAATGAGTTTCAACCTGAAAGATTCAAAGATGGTGTCTCTAAGGCTTGCAAGTATCCACAAGCATATGTGCCTTTTGGAGTGGGTCCTCGCTTGTGTGTTGGAAAAAACTTTGCAATGGTTCAATTGAAGGTTGTTCTTGCCCTAATTGTCTCTAGGTTTAGATTCTCTCTATCCCCTAGCTACAAGCATGCTCCTGCTTATAGAATGATTATAGAACCAAGGCATGGTGTGCATCTTCTTATTCACAAGATATGA | 1539 | 0.3866 | MEVVMLVCFIGMVGMVMWVVFVYGIEWVKSQRVRRKLRMQGISGPPPSFLHGNLLEMHRINTASQAKVVHSSDHTHDFTESLFPYFEIWRKQYGLLYTYSTGIKQNLYMNSPELISEMNKLMTLDLGKPSHITNNLASLLGNGILRANGLSWSHQRKLIAPEFYMEKVKGMVDLMIESTQPLLIKWDKAIEAKLGSDDDDGNGTVEVEVDEDLRSLAADVISRVCFGHSYSKGIEVFSKLRLMQKKMSKHGTFLFGIKGLRDTLNNIWRGKENEIKIMEKEVESLIWELVEERKQECSDKPSSKKDLMHLLLEAAMSDDDSTCLPKDFAKQFIVDNCKNIYFAGHETVAITASWSLMLLATYPEWQDRVRKEVAQVFPNGIPNVDSLPLLKTVYKDTQIGKLLVPKGVVLWTLIPTIHRDPEIWGANANEFQPERFKDGVSKACKYPQAYVPFGVGPRLCVGKNFAMVQLKVVLALIVSRFRFSLSPSYKHAPAYRMIIEPRHGVHLLIHKI* | 513 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo10g2860 | 512 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 4 | 507 | - | - | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 352 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 332 | 349 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | E-class P450 group I signature | 216 | 234 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | P450 superfamily signature | 343 | 360 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506|GO:0016705 | |
| Amo10g2860 | 512 | Gene3D | Cytochrome P450 | 27 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | Coils | Coil | 275 | 295 | - | - | |
| Amo10g2860 | 512 | PANTHER | CYTOCHROME P450 714A1-RELATED | 4 | 507 | - | - | |
| Amo10g2860 | 512 | Pfam | Cytochrome P450 | 389 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | Pfam | Cytochrome P450 | 81 | 392 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Amo10g2860 | 512 | SUPERFAMILY | Cytochrome P450 | 73 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo10g2860 | Amo-Chr10 | 93628379 | 93634574 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo10g2860 | 114 | 505 | Cytochrome P450 | AT5G24900 | 46.973 | 6.71e-142 | 412 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo10g2860 | K20661 | - | gmx:100815776 | 699.893 |