Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2858 CTTTTGCCGGCTTTGTTATGTGGAGGCTCAGAACGAGAAGCCAAGGCCTTACTTAGGTGGAAAGAAACCCTCCCCGCTCAAGCAATTCTTGATTCATGGGCTTTCGAAGCCCAAACTCAAAGCCCGTGTTCATGGAGAGGGATCACTTGTGATTCTCAAGGCAGTGTGGTTGTCATAAACTTAGCATACACCGGACTTACAGGTACCCTTGAAAACTTAGACTTGACTGCTTTTCCCAACCTCTTACAACTTGATCTCAAAAGAAATAATCTTACAGGCACCATACCCCAAAACATTGGGATACTCTCAAAACTTCAATTCCTTGACCTTTCCACCAATTCTCTCAATGGCACTTTACCTCTTTCTATTGCAAATCTCACCAAAGTCTATGAGCTTGATGTGTCAAGAAATAACATAACAGGAACACTAGACCCTCGCTTATTTCCTGATGGAACCAATGAGCCAAGAACTGGCCTCATTAGCATCAGGAATTTCTTGTGTGAAACAACCCTTTTAGGTGGAAAAATTCCAAATGAAATAGGCAATATAAGAAACTTGACATTGCTAGCTTTAGATGATAACAACTTTTATGGGCCTATACCTCCATCTATAGGAAATTGCACACATTTAAGTGTTCTTAGAGTGAATCAAAACCATTTCTCAGGTACAATACCTTCTAGCATTGGCAAGTTAACAAATCTAACAGACTTGCGGTTTCAAATCAACAACTTAACCGGCACGGTGCCACGAGAATTCGGAAACTTATCTTCATTAGTTGTACTTCATCTCGCTGAAAACAACTTTGTTGGAGAATTGCCACCTCAGGTGTGCAAAGGTGGAAAGCTTGTCAACTTCAGTGCAGCACACAATAATTTCAATGGTTCAATCCCAAGAAGCCTTAGAAACTGCCCAACATTGTATCGAGTTCGAATCGAGTACAATCAGTTGACAGGCTATGCAGATCAAGATTTTGGAGTGTATCCAAACCTCACTTACATTGATTTCAGTTACAACAGGATTCGAGGCCAGTTGTCTGCAAAATGGGGTGCCTGCAAGAACTTGCAAGTACTTAAAATGGCTGGCAATTCCATAAGAGGCTTTATTCCAGAAGAAATTTTTCAACTGAAGCAGTTAGAAAGGCTTGACCTGTCCTATAATCAAATCTCAGGGAAGATTCCTTCACAAATTGAAAATGCAAGTCGCTTGTATGAATTGAATTTGGGTGGCAACAAACTTACTGGTATGACACCAGAAGAAATTGGAAAGCTTTCTAATTTGGAGGCCTTAGACTTGTCCAAGAACATGTTGTTTGGACCAATCCCAAATCAGATAGGGGATTGCACCAACTTGAATCTCTCTCACAACAATCTCTCTGGTCGAATCCCCGAGTCCCTTGGTGAAATGTTGAGCTTGTTAACCATCAACCTCTCTTCCAATCATCTGGAAGGCCCTGTGCCTAGAAATGGCATATTCAACGCTTCACTTCTTCCAATGGATTTGAGAAACAACAAAGGTTTATGTGGCAATATCCAAGGTTTGCAATGTGAAGTCTCAGTCACTGAACCTGTTGATGGAAGTAGTAAAAGAAATGAAGTAGTAATACTTTCTGCTGTTATATTGGGAGGAATTTTGTTTCTTTCATTGGTGTTAGTTGGGATTTTGTGCTTCAAGAAAAAGCCAAAACCAACAGTTTCAAAACAAAACTTTTCAGCAAGCATGAGAGAAAATCAAAATCTGTTTTCAATTTGGTCATTCAACGGCAAAATTGTCTATAGAGATATAATTGAAGCTACCAACAACTTTGACAGCCATTGCTGCGTCGGCGAGGGAGCGATCGGGAGAGTTTACAAGGCAGTTATCAAAGGAGGACAACAAGAAGAAGTATTTGCTGTGAAAAAGTTGAAATGTGAATCAGAAAGCTTAGATGTTGAGAGTATAAAATCCTTCCAGAGCGAAGTGGAAGCCATGAGAGAAACGCGCCATAGAAACATTGTGAAGCTCTATGGATTTTGCTCTAACAAGACACACACATTCTTGATCTATGAGTATTTGGATCGAGGGAACTTAGCTGAGATGCTTGGAAATGATAGCAAAGCATTGGAACTGGATTGGCCTAAGAGGGTGAACATTATCAAAGGCGTGGCGCATGCTTTGTCCTATATGCATCATGATCACACTCCACCATTGATTCATAGAGACATATCGAGCAAGAACATTTTGCTGTCCTCCAATCTTGAAGCTCGTGTCTCCGATTTCGGCACTGCTAGGTTCTTGAAGCCGGATTCATCGATTTGGACGTCGTTTGCAGGCACATATGGCTATGCTGCTCCAGAACTCGCTTACACGATGGTGGTGACTGAGAAATTGGATGTGTTCAGCTTTGGCGTTTTGGCCTTAGAAGTTATTTCAGGAAAGCACCCCGGTGATGTTGTTCTTCAAATAAAAGCTTCTAGTGAATCAAGTATAAACATGATTGAAGTTTTAGACCCACGCCTCTCACATCCAACAAATGAACATATTCTGAAAGAGTTGACCTCGATTGCAAATATAACCACCGCCTTTTCCCACCTCCCTTCCACCTCCTCCTCTCCCCCTCCGCCACCTCCCGGTTCTAACCCCCACCGCGTTCTCCCTCTCCGGCGCTTCCCAACCATCATCATCGGAATCCTATCCCTCCCAAACCACACTGCTCCGTCCTCTTTCCCTTGCTCCTGCTTCCAATTCTCCGATGACTCCGCCTCCGTCTGCTGCGACCTCCTCCAATTCCAACCTTATGCTTTAGGCAAGCAAATCCGCGTCACAGCTTGGAACTTTGTTCCCTTTAAGTGCCATGGAAAGAGCCGTGCGGGCTTCTTGGAGATCATCAAATGGTGTTTTCTTGATCCCAACGAAGAAGCAAACCAAATGGATTCTATTCCGCTTGTGCCGAATCGAAGTTGCGGCAGCTACGGGAACAACTCCAAGGCTCGTTATCGAGTCTACGGAGTGGTGGAGTCGGTTGGCCCTGTTTCCGTTGTCCCTTGTACAATGGTTGCTAGTGTATCCGATTCGGATTTGAATTCGAGTTCTAAAGTGAAAATGTTAGGGTTTGTGGTTCAATTGATGTGTTGTGAGTGCAGGTTATGCGGTTCCAAAGAGTTAATAAGCGATTTAGAGAGTGGGAGTGGTCATTCTTTTACTAAAAAGGAGACAGTGTATTTTTGTGGAGGTGCTTCCCCTTGGCACCCTGCAATGACTAAGCTAATTGGTAACCGAGTTATGGTGTCGCGACTAAAGAAGAAGTTGGCTTTCATAACGAAGGAGGACTCTTGGGTTATGCATGTGACCGTGGATGTCTCGGTTCTTCATGTGTGTCGAGTTTCCAAGAAATGGCTACCCTGCTTGAAGAGTGGTATGAAGATGAAGGGTGAATGTGGCACGTACACTGGCGTAATCAAAGGTGTCTACATGCAAGGAATGGCTTTGGAGTTGGATCATGATGTTTGGCTTCTTTTAACTGATGAACTGCATACTCTGATGCATGGTTTGAGAGTTGGAGCTGTTGTATCTGTGAGAAATGTGCATTTTGTGGATCCACAGTTTTCATGGACAAAAATTGTAATTCTTGGAGCCTGCGTTAAGACGAGCATTATTGTGGAATCATTCTCTCCATTGGAAACTGCGTGTAATGTAGTTTTGAAATCTCAGAGTATGCTTGGACAGTTCATTCAGTCATTACCATTTTCYGCAAGACTCTGGCTATTACTTCTTRTCTCAAGCTTACGTAAAATGTTTGCTGGTAGCTTAAGCGACAAGGAGATTTTGGGATCCAAACATGAAGAAGGGCTTGCTCAGATGTATGCCAGTTCACTGCTTCCTCCATCAGTGTTTCAATCAGAGGTAATACCGGCGTCTTTGTTCATCCATCACTGTATAGATACCTTAGAGAGAACTCTAAAATCAGAAAACCGCTGTAAATTATTGCCTGTTGGCAACCATTCCAGAGTTTTACCTCATCTAGCAAGATATAGTAGCAGACCAGGGAGGAAGACTATTCCTGGCAAAGATGTAGGCATTACTTTGCTTGGACATCTAAAGATTAATCCATTGACTACCAGACTGCAGCTGGTTGATGCTACTGGTGGTATTGATGTTCTTATTCCAGACCTTCCCTTAACTTGGAATGCTGAAGAAATATATGAGGTGACAGAGTATGATATTTTTGTGGACGGCATAGGTGAACTTGGGGATCGCTTGGAATTGCTTGAGATTGAGTCATTATCATGCAGAACGATCTTCAATTACATTCAACCAGCCAGAGAGAGGGAGTTAAGCAGCTCAATTTTTGCTTACTTTCATTGGAACAATGCAAAATGCAGAAAATTTCCCCGTTACCCTTGTAGAGATAAGAAAAATGAAAGTCTGGTGCCCAAGCCTGGATGTTACCATTTGCTTAGGGTATCTCACAAATTTCCTCTGCAAGGGAAGTATTCTAATATCATGAAATCAGACAAGTCAAATACTTTTGTTGAAGCGAAAGTCTTGCCATTTGATTTGTTGCTTTCTGAGAAGAGAGAAATTTTGCATTCATATAATGTTTCAAGGGATAAGACCAAGGAAATCTCCGATTATTTAATTAATGGTAACAATGAGGAGCAAGTATGGTCCAATAAGAGGCAGAAACTTGATAAGGAATCAGCATGTGCATCGAAGGATGACTTTTTCACTTCCATTAATGAGCTGAGAGCTTGTTCCAATTTGTTGAATATATCAAAAGAGAACAAAAGAAGTTTTGATTTGAGTTCTGATGATATATCGTGTCTGGCCAATTTTAGAAGGCTACAACATGAGAATGTGATTTGTACTGCTGTTGTGCGCTCTAAATCATCTACAAAGAGTTTTGACTCAAAATCAAATGCAAGGAAAGTTTTGCTAGAGTTCTCATTAGATAGCTTTTTCACGTATCAGTCATTGAAGATTGGTGATTGTTACATCATAGAGCATTGTACAAAAGACTGCTTTTGCAATATGAAAGATGCTGGCTTTGGTAGCCGTGCTAAATTTCGTGTTGGTTCTGGGAMACTAATCTTCAGCATTTCATTCATATCTGGAAAAGATTCTGTTTCTCCTAGCGCTGATGKGATTTTGACTAAAGAGCAAATTGAAGGATTTTTGCTAAGATCCAATGTTGATTCACCAGATGTCTCTTCAGATGTTTGTCTGTATCTCCCTGTCAACCTCACAGATCTCCTGGATGTTAACATTATCGAATCAGAGTACAGTGAAATGCATAAATATGCAGTATCAGAAGAGAGTGCTAATGTTTCTGTGGGCCCTGGGATTGTAGCAGGAAGGACTAATCTTTGTTGTGGTTCTCAAAATTCAAACTTCRTGTTTCCCGAGGGAAATTTGATTTCTCTTGAGGGTGATGTGGTTGACATTCATGATATTGGCTCTAGTTTAAGCAATGCATGTTCAAGTGCTGCAAGCCTTGACTCTCTTCAGTTGAAAGGCCTTATTCAAAATAGAAAAAGTCTCTGCATTCATGTATTAGTGCATAAACATATGGTGAAGATATTTGGTTCTATAAGCAAGCATGCTTATCCAATTGGTTTTGGACCTGGTGTAACTGCAACATTTCATCGAATCCTTGATGCGAGGTCCGAGAATAAATTCATGTTACTGCCTGTATCATTTATTGTGATAAAGTCAATTAAAGTACATGATAAACAGTGCACTGACTGGTCCTTCAATTTAAGCCTTCTTAAAGATGCATACAATCCATCTCCAGATTCTGTCTCTTGTTTGATCTCTCAGTTGCATCAGTGCCCCAGTAACAAGCAAATAATGCTTCGGTGCAGGGTTGTCGCAGTCTTTATTTTAGTTCTGGAGAGGAACACTACTGCTTTTGACATTCCACTTGCTGGTTTTCTGTTGGATGATGGATCATCGTCATGTTGTTGCTGGGCCAATGCTGAAAGGGCAGCAGCCTTGTTGAGACTACATGAAGAACCCACCACATCTCGTAATCTAGGGAGAATTTTGAGGAATTATCAGAAAATTACTGTGAAAAACCAAGGGTTATTTATTGAGTCACCTTTTCAAGATCTTGCTGTATCTGTTACTTCTGGCAACGCCATTTACCAATATGACGAAAACAACCTCAAATTCATGATCTTCAATGCGTGTGCTGGTAGAGTATGGAATGTAGTTGCTAGTCTGATGGATGCAGAGGAAGTTAGACAGTTGGACAATGAATACCTCACAGAAACAACGAATCTGCGAAGCTTACGGAATATATGGGCCAACCAAGTTTCTTGCCCCCGCATGCTGGCCGAGGCAAAGAACATGCTTCAGGAACTTCGGAGAAGTTCGTGCTTATAA 6363 0.4151 LLPALLCGGSEREAKALLRWKETLPAQAILDSWAFEAQTQSPCSWRGITCDSQGSVVVINLAYTGLTGTLENLDLTAFPNLLQLDLKRNNLTGTIPQNIGILSKLQFLDLSTNSLNGTLPLSIANLTKVYELDVSRNNITGTLDPRLFPDGTNEPRTGLISIRNFLCETTLLGGKIPNEIGNIRNLTLLALDDNNFYGPIPPSIGNCTHLSVLRVNQNHFSGTIPSSIGKLTNLTDLRFQINNLTGTVPREFGNLSSLVVLHLAENNFVGELPPQVCKGGKLVNFSAAHNNFNGSIPRSLRNCPTLYRVRIEYNQLTGYADQDFGVYPNLTYIDFSYNRIRGQLSAKWGACKNLQVLKMAGNSIRGFIPEEIFQLKQLERLDLSYNQISGKIPSQIENASRLYELNLGGNKLTGMTPEEIGKLSNLEALDLSKNMLFGPIPNQIGDCTNLNLSHNNLSGRIPESLGEMLSLLTINLSSNHLEGPVPRNGIFNASLLPMDLRNNKGLCGNIQGLQCEVSVTEPVDGSSKRNEVVILSAVILGGILFLSLVLVGILCFKKKPKPTVSKQNFSASMRENQNLFSIWSFNGKIVYRDIIEATNNFDSHCCVGEGAIGRVYKAVIKGGQQEEVFAVKKLKCESESLDVESIKSFQSEVEAMRETRHRNIVKLYGFCSNKTHTFLIYEYLDRGNLAEMLGNDSKALELDWPKRVNIIKGVAHALSYMHHDHTPPLIHRDISSKNILLSSNLEARVSDFGTARFLKPDSSIWTSFAGTYGYAAPELAYTMVVTEKLDVFSFGVLALEVISGKHPGDVVLQIKASSESSINMIEVLDPRLSHPTNEHILKELTSIANITTAFSHLPSTSSSPPPPPPGSNPHRVLPLRRFPTIIIGILSLPNHTAPSSFPCSCFQFSDDSASVCCDLLQFQPYALGKQIRVTAWNFVPFKCHGKSRAGFLEIIKWCFLDPNEEANQMDSIPLVPNRSCGSYGNNSKARYRVYGVVESVGPVSVVPCTMVASVSDSDLNSSSKVKMLGFVVQLMCCECRLCGSKELISDLESGSGHSFTKKETVYFCGGASPWHPAMTKLIGNRVMVSRLKKKLAFITKEDSWVMHVTVDVSVLHVCRVSKKWLPCLKSGMKMKGECGTYTGVIKGVYMQGMALELDHDVWLLLTDELHTLMHGLRVGAVVSVRNVHFVDPQFSWTKIVILGACVKTSIIVESFSPLETACNVVLKSQSMLGQFIQSLPFSARLWLLLLXSSLRKMFAGSLSDKEILGSKHEEGLAQMYASSLLPPSVFQSEVIPASLFIHHCIDTLERTLKSENRCKLLPVGNHSRVLPHLARYSSRPGRKTIPGKDVGITLLGHLKINPLTTRLQLVDATGGIDVLIPDLPLTWNAEEIYEVTEYDIFVDGIGELGDRLELLEIESLSCRTIFNYIQPARERELSSSIFAYFHWNNAKCRKFPRYPCRDKKNESLVPKPGCYHLLRVSHKFPLQGKYSNIMKSDKSNTFVEAKVLPFDLLLSEKREILHSYNVSRDKTKEISDYLINGNNEEQVWSNKRQKLDKESACASKDDFFTSINELRACSNLLNISKENKRSFDLSSDDISCLANFRRLQHENVICTAVVRSKSSTKSFDSKSNARKVLLEFSLDSFFTYQSLKIGDCYIIEHCTKDCFCNMKDAGFGSRAKFRVGSGXLIFSISFISGKDSVSPSADXILTKEQIEGFLLRSNVDSPDVSSDVCLYLPVNLTDLLDVNIIESEYSEMHKYAVSEESANVSVGPGIVAGRTNLCCGSQNSNFXFPEGNLISLEGDVVDIHDIGSSLSNACSSAASLDSLQLKGLIQNRKSLCIHVLVHKHMVKIFGSISKHAYPIGFGPGVTATFHRILDARSENKFMLLPVSFIVIKSIKVHDKQCTDWSFNLSLLKDAYNPSPDSVSCLISQLHQCPSNKQIMLRCRVVAVFILVLERNTTAFDIPLAGFLLDDGSSSCCCWANAERAAALLRLHEEPTTSRNLGRILRNYQKITVKNQGLFIESPFQDLAVSVTSGNAIYQYDENNLKFMIFNACAGRVWNVVASLMDAEEVRQLDNEYLTETTNLRSLRNIWANQVSCPRMLAEAKNMLQELRRSSCL* 2121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2858 2120 ProSitePatterns Tyrosine protein kinases specific active-site signature. 729 741 IPR008266 GO:0004672|GO:0006468
Amo10g2858 2120 Pfam CST, telomere maintenance, complex subunit CTC1 882 1180 IPR028262 GO:0000723
Amo10g2858 2120 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 450 - -
Amo10g2858 2120 SMART LRR_sd22_2 231 257 - -
Amo10g2858 2120 SMART LRR_sd22_2 375 401 - -
Amo10g2858 2120 SMART LRR_sd22_2 423 442 - -
Amo10g2858 2120 SMART LRR_sd22_2 102 128 - -
Amo10g2858 2120 SUPERFAMILY Protein kinase-like (PK-like) 592 849 IPR011009 -
Amo10g2858 2120 Gene3D Transferase(Phosphotransferase) domain 1 684 857 - -
Amo10g2858 2120 SUPERFAMILY L domain-like 10 147 - -
Amo10g2858 2120 Gene3D Ribonuclease Inhibitor 237 517 IPR032675 -
Amo10g2858 2120 SMART LRR_typ_2 78 102 IPR003591 -
Amo10g2858 2120 SMART LRR_typ_2 375 399 IPR003591 -
Amo10g2858 2120 SMART LRR_typ_2 255 279 IPR003591 -
Amo10g2858 2120 SMART LRR_typ_2 423 447 IPR003591 -
Amo10g2858 2120 SMART LRR_typ_2 126 150 IPR003591 -
Amo10g2858 2120 SMART LRR_typ_2 231 254 IPR003591 -
Amo10g2858 2120 PRINTS Leucine-rich repeat signature 105 118 - -
Amo10g2858 2120 PRINTS Leucine-rich repeat signature 423 436 - -
Amo10g2858 2120 Gene3D Phosphorylase Kinase; domain 1 563 683 - -
Amo10g2858 2120 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 449 855 - -
Amo10g2858 2120 Pfam Leucine rich repeat N-terminal domain 12 51 IPR013210 -
Amo10g2858 2120 MobiDBLite consensus disorder prediction 860 874 - -
Amo10g2858 2120 SUPERFAMILY RNI-like 171 507 - -
Amo10g2858 2120 Pfam Protein kinase domain 607 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2858 2120 Gene3D Ribonuclease Inhibitor 9 152 IPR032675 -
Amo10g2858 2120 Gene3D Ribonuclease Inhibitor 153 236 IPR032675 -
Amo10g2858 2120 MobiDBLite consensus disorder prediction 855 875 - -
Amo10g2858 2120 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 449 855 - -
Amo10g2858 2120 ProSiteProfiles Protein kinase domain profile. 601 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2858 2120 SMART serkin_6 601 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2858 2120 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 10 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2858 Amo-Chr10 93602689 93618197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2858 12 777 Receptor kinase-like Gene Family AT4G08850 38.033 1.42e-177 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g2858 CTC1_2 1.9e-89 CL0586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2858 - - gmx:100816348 1424.07