Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2857 ATGGTTTTGGAACTCGTTGGTGGAGCTTTTCTAGGAGCTGTGTTTAATGTACTGCTTGAAAGAATAGCTTCCCCTGAAGTACTCAGCTTCTTGAAGGGGAAGAAAATGAACAACAGGTTGCTGAAGAAGTTGAAGCTGATTTTGCTGTCAATTCATGGAGTTCTTGATGATGCAGAGGGAAAGCAGATTACAAATCCAGCAGTGAAAGAATGGCTAGATGAGCTTAAAGATGYTGCATATGAAGCTGATGATTTGTTGGATGAGATATACACAAGATCTAAATATGGTGCTGWTGAGGTATGCAACTTTGACTTTAATTCTTGGAGCTCATTTGAGAATGAAGTTGAAGAAAAAATGGAGGAGATCATTGAGAAGTTAGAATTTATCGCGAAGCAGAAAGATTTCCTCGGTCTAACTGGGGATATAGGAGTCAAGATCCCACAGAAGACTCCCACAACATCTATAGTTGAAGGGTCTAATGTATATGGAAGAGATGATGATAAGGAGTTCATGATCAAGCTACTATTTGATGTTGAAAATGGTGATRACAAGATAGGAGTGRTTCCTATTGTTGGCATGGCCGGAATTGGAAAAACAACCTTGGCTCAACTTGCTTACAATGATGTTAGAGTGAAGGAACACTTTGATCTCAGAGCTTGGGTCTGTGTTTCTGAGGATTTTGACATATTCAAGATTACTGAAACACTTTTGGAGATTCTCACCATGTGCAATCATGCTATTAGAGATCTAGATTCACTTCAAGTTGAACTGAAGAGGAGGTTGAAAGGGAAGAAGTATTTGTTYGTTTTGGATGATATGTGGAATGAAAACTATGATGATTGGGACATGTTGAGAARTCTTCTTCAATATGGTGCTCATGGGAGTAAGATCATTGTGACTACAAGAAGCGAGCGAGTAGCATCAATCATGCAAACCATTCCATCATATCACTTGGGATATTTATCAGATGAAGATTGTTGGATGTTGTTYGCAAAGCATGCRTTTGATTATAGAAGCTCTGATACCTATAAAATCATGGAAGGAATTGGTAAAAGCATTGCTAAGAAGTGTAAAGGGTTGCCTCTGGCTGCGAAAACATTAGGAGGACTATTGCGCTCTAAAACAGATGTGAAAGAATGGGACAACATATTGAAGAATGAGATATGGGAGTTGTCAGATAGAAAGAGCAATATTCTTCCAGCTTTGAGATTGAGTTATTATTATCTYCCTTCACATTTAAAGCGATGTTTTGCTTACTGCTCAATCTTTCCTAAAGGGTACGAATTCGACAGAGAGGAGTTGATATTGTTATGGATGGCAGAGAATCTACTGAAAGAACCAAAAAGAAACAGAAGACTTGAAGAAGTTGGAGATGAGTACTTTCATGAATTGGTAGCAAGGTCATTTTTCCAACAATCAAGACATAATGGATCACTCTTTGTGATGCATGATCTTATCAATGACCTTGCTAAATAYGTATCTGGAAAATTCTGCATCAGATTGGAAAACAACTTRGATGAAGATGCYGGGGAAAGGACTCGTCACTTGTCACAAATTATTGCAAATAGGTATCCATCTATAAACTTTGATGCTTTCCAAAAGGCAAGTGGTCTACACACTTTTTTGCAATTAAGCTTGGTGGATCCACCAATATGCCTTTTCAACAAGGTGCCAAAGGATCTGTTTATGAAGCTAAGGCGCTTGCGAGTGTTATCTTTGGTTGGTGCGCGTGGTAGTCTTAAYGAATTGCTCCRTTTCATTGCCAAACTCAGACATCTGAGATACTTGGATGTGTCACAAACTCAAATAAAGAAGTTGCCTGGTTCCATCTGTACTTTATACAACTTACAAACACTCAAGGCTGCAAGATGTCCTCATCTCACAGAATTGCCAAGGAATATGCATTGTCTAGTCAATTTRAGATACCTTGACATCTCGKYTTCTCGGMTAGAACGGATGCCATTGCACATGAGTAASCTAAAAAGCCTGCAAAAGTTGAGCAATTTCTTCGTGAGCAAGGAATCTGCTTCYTCGATTGGTGAATTAGGCGAACTATCACATCTAAGAGGTTCTTTGATGATTCAAAACATAAAGAATGTGGTTGATCCTAAAGATGCAATGAAAGCAAGTTTGAAGGACAAGAGGAATCTTGATAAGTTGACTTTTGATTGGGGAAGGTCTGCTGATACAGAAAATTCCCAGCATGAAAAGAAYATACTCGAAAAGCTGCAGCCRAATACAAATTTGGAAGCCCTTGAAATTGTGCACTACACAGGTACTCAGTTTCCAACTTGGTTGGGAGATCCTTCATTCTTCCACCTAGTTTCTCTGTCACTTAATCATTGTAAATATTGCCACATATTGCCATCACTTGGACAGCTTCCATATCTTAAAGAACTACATATTTCAAAGTTTAAGGAGCTAGTTAGCATTGGACCTGAATTTTATGGAGTCAGTGGTTGCACAGGGAATCAACATTTTCCTTCTCTTGAAATTCTAACATTTTATGGCATGCCGGCGTGGGAGAAATGGATTCATGCAGGTGAAAGTGAAGGCTGCAAAGTTTTCCCTTGTCTCAGAGAGCTTCATTTGGAGGAATGTCCACAACTATCTGGTGATTTGCCTACTTTTCTTCCTTCTCTTACAAATCTTACCATGAGATACTGTAATCAGATTTCAACTTCACTCCCAAAAGCTCCGGCTATGCGATCATTACATGTTGATAACTGTTGGAAAGTAGAAATCCTAAAAAAACTAATGGGGTGCCGGGAATCACTTGAATCATTAGAGATATACAATAGCTGCCACTCTCTGAAGTCTTTCCCACTAGATTTCTTCCCCTATCTTAAGTCCTTGGTAATCTGGGGATGTGAAAATCTAGAATCTCTAACTACTTCAGCGCCACAGACGGAGGGAACACTCGAGCTTCTAGCATCTCTAAACTCATTGTGCATATGGAGATGTCACAACTTTGTGAACTTTCCTCATGCAGGATTGCCTACACCCAACCTTGCTTCTTTGAAAGTTCGCTACTGCAGCAAGTTAAGTTCACTTCCTAAACAAATGCATACTCTTCTCCCAAGTTTAAAGGAACTCCAAGTTTGGAGTTGTCCAGAAATCAAGTCACTTCCAAATGGAGGTTTGCCAACTAATTTGAAGTCATTCAAGATTAGAGATTGTGACAACCTCTTTGCTCGCCGGCTGGACTGGAATATGTCGTGCTTGGCCTCGCTCGAGCACTTTTCAGTTGAGGGAAAATGTGAAGATGTTGAGTCCTTTCCAGAGGAAGGCTTGCTTCCTTCCACACTAACACAACTGGAGATTCAAGGTTTATCAAACCTTAAAATTTTGGATATGAAAGGGCTTCAAAACCTCACTTCTCTCAAGAAAATTCAGATCCTTGATTGTTGTAAGCTTGAGTCACAAGGAGAAGGAGGAACATTGCCTTTATCTGCAGTTGATCTTGATATTTGGAAGTGTCCTTTACTGAAAGAGCAGTGGCAGAGAGAGAACAAGCCCAACATTTCTGGCAACCATGGCATTTGGATCTGTGACCAATACATTGAAGTGGATGAGCAGCATGATTTGTAG 3591 0.3946 MVLELVGGAFLGAVFNVLLERIASPEVLSFLKGKKMNNRLLKKLKLILLSIHGVLDDAEGKQITNPAVKEWLDELKDXAYEADDLLDEIYTRSKYGAXEVCNFDFNSWSSFENEVEEKMEEIIEKLEFIAKQKDFLGLTGDIGVKIPQKTPTTSIVEGSNVYGRDDDKEFMIKLLFDVENGDXKIGVXPIVGMAGIGKTTLAQLAYNDVRVKEHFDLRAWVCVSEDFDIFKITETLLEILTMCNHAIRDLDSLQVELKRRLKGKKYLFVLDDMWNENYDDWDMLRXLLQYGAHGSKIIVTTRSERVASIMQTIPSYHLGYLSDEDCWMLFAKHAFDYRSSDTYKIMEGIGKSIAKKCKGLPLAAKTLGGLLRSKTDVKEWDNILKNEIWELSDRKSNILPALRLSYYYLPSHLKRCFAYCSIFPKGYEFDREELILLWMAENLLKEPKRNRRLEEVGDEYFHELVARSFFQQSRHNGSLFVMHDLINDLAKYVSGKFCIRLENNLDEDAGERTRHLSQIIANRYPSINFDAFQKASGLHTFLQLSLVDPPICLFNKVPKDLFMKLRRLRVLSLVGARGSLNELLXFIAKLRHLRYLDVSQTQIKKLPGSICTLYNLQTLKAARCPHLTELPRNMHCLVNLRYLDISXSRXERMPLHMSXLKSLQKLSNFFVSKESASSIGELGELSHLRGSLMIQNIKNVVDPKDAMKASLKDKRNLDKLTFDWGRSADTENSQHEKNILEKLQPNTNLEALEIVHYTGTQFPTWLGDPSFFHLVSLSLNHCKYCHILPSLGQLPYLKELHISKFKELVSIGPEFYGVSGCTGNQHFPSLEILTFYGMPAWEKWIHAGESEGCKVFPCLRELHLEECPQLSGDLPTFLPSLTNLTMRYCNQISTSLPKAPAMRSLHVDNCWKVEILKKLMGCRESLESLEIYNSCHSLKSFPLDFFPYLKSLVIWGCENLESLTTSAPQTEGTLELLASLNSLCIWRCHNFVNFPHAGLPTPNLASLKVRYCSKLSSLPKQMHTLLPSLKELQVWSCPEIKSLPNGGLPTNLKSFKIRDCDNLFARRLDWNMSCLASLEHFSVEGKCEDVESFPEEGLLPSTLTQLEIQGLSNLKILDMKGLQNLTSLKKIQILDCCKLESQGEGGTLPLSAVDLDIWKCPLLKEQWQRENKPNISGNHGIWICDQYIEVDEQHDL* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2857 1196 Coils Coil 79 88 - -
Amo10g2857 1196 Pfam NB-ARC domain 171 403 IPR002182 GO:0043531
Amo10g2857 1196 PANTHER OS05G0414200 PROTEIN 22 963 - -
Amo10g2857 1196 Gene3D - 19 131 - -
Amo10g2857 1196 Gene3D Ribonuclease Inhibitor 970 1047 IPR032675 -
Amo10g2857 1196 Gene3D Ribonuclease Inhibitor 1048 1151 IPR032675 -
Amo10g2857 1196 Gene3D Ribonuclease Inhibitor 679 874 IPR032675 -
Amo10g2857 1196 Gene3D Ribonuclease Inhibitor 875 969 IPR032675 -
Amo10g2857 1196 Gene3D - 145 314 IPR027417 -
Amo10g2857 1196 Gene3D - 320 404 IPR042197 -
Amo10g2857 1196 PANTHER DISEASE RESISTANCE PROTEIN RP 22 963 IPR044974 GO:0006952
Amo10g2857 1196 SUPERFAMILY L domain-like 481 893 - -
Amo10g2857 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 420 IPR027417 -
Amo10g2857 1196 Coils Coil 112 132 - -
Amo10g2857 1196 Pfam Rx N-terminal domain 10 94 IPR041118 -
Amo10g2857 1196 SUPERFAMILY L domain-like 826 1160 - -
Amo10g2857 1196 PRINTS Disease resistance protein signature 357 371 - -
Amo10g2857 1196 PRINTS Disease resistance protein signature 260 274 - -
Amo10g2857 1196 PRINTS Disease resistance protein signature 588 604 - -
Amo10g2857 1196 PRINTS Disease resistance protein signature 187 202 - -
Amo10g2857 1196 Gene3D - 405 492 IPR036388 -
Amo10g2857 1196 Coils Coil 68 77 - -
Amo10g2857 1196 Gene3D Ribonuclease Inhibitor 504 678 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2857 Amo-Chr10 93593077 93597704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2857 160 306 WRKY Transcription Factor Family AT4G12020 32.075 1.36e-08 57.8