Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2843 ATGGCGGCGTCGTCGTCCCTCTGCGTCGCCCACAGATGCTCTGTTCTGCTCCGCTCGTCCGCCTTGCCTATTGCATCCCCTCGTCCCGCCTTGCCTCACCGCGCCTCGCGGTGCCTTGCCTCAAATCGCCGCTCCTCAAATCTTCCTCCTACTACACTAAGAACGGGAGAAATAGATTTGCGGGCACAATTGGCCTCTATTCCCACTAGCAATCAAGAAACTGAACTTTCCATTGACGATGACTTTGATATCTCTGGATTGAAGCCCCTCAAAGTCCCTACCCAGATCTTCTTCAAACATTCTTCCATGGATCCCCACAAAAAGGGTTCTACAGAAGCTGAGTTTTTCACTGAGTATGGAGAGGCAAGCCGATACCAAATCCACGAAGTCATCGGGAAAGGAAGTTATGGTGTCGTGGGCTCTGCCCTTGACACTCATACTGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATCCTAAGAGAAATTAAGCTCCTGCGCTTGCTTCGCCATCTTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCAAGAGTTCAAGGATATCTACGTTGTCTTTGAGTTGATTGAATCTGACCTTCATCAAGTAATCAAGGCAAACGATGATCTTATACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAGCAAATGTTTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCCAATGCTGATTGCAAACTAAAGATATGTGATTTTGGACTTGCTCGAGACTATGTTGCAACTCGGTGGTACCGGGCACCTGAATTTTGTGGTTCTTTTTTCTCTAAATATACCCCTGCAATTGATATCTGGAGCATTGGATGCATATTTGCAGAAATGCTCAATGGAAAGCCATTGTTTTTGGGTAAAAATGTGGTGCACCAATTGGATCTCATGACCGATTTGCTTGGCAGTCCTCCACCTGAGTCCATTGCAAGGGTAGCAGCTAATTATGTAGCAATGGTTCTTTCCGGACAAGTATTTGATAGAATGATGTTTCTTCCCGTGTATTGTCTGAACCTCATCCAGGAAAAGAAGCGAAAGATTAATGCAGAAAAGAAGAGGAAAGAGCTCGAGAAGGAGAGAGTGAAGGATGAACTTCTGACGAGAAAGCGCCAGAATGCTTTGCAGCATGTGCTGGTTGTGCTGACTTTGCGGCATTCTCAGTCGTTATAG 1269 0.4444 MAASSSLCVAHRCSVLLRSSALPIASPRPALPHRASRCLASNRRSSNLPPTTLRTGEIDLRAQLASIPTSNQETELSIDDDFDISGLKPLKVPTQIFFKHSSMDPHKKGSTEAEFFTEYGEASRYQIHEVIGKGSYGVVGSALDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHLDIVEIKHIMLPPSRQEFKDIYVVFELIESDLHQVIKANDDLIPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARDYVATRWYRAPEFCGSFFSKYTPAIDIWSIGCIFAEMLNGKPLFLGKNVVHQLDLMTDLLGSPPPESIARVAANYVAMVLSGQVFDRMMFLPVYCLNLIQEKKRKINAEKKRKELEKERVKDELLTRKRQNALQHVLVVLTLRHSQSL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2843 422 Pfam Protein kinase domain 125 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2843 422 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 84 346 - -
Amo10g2843 422 ProSitePatterns MAP kinase signature. 160 263 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo10g2843 422 Gene3D Transferase(Phosphotransferase) domain 1 221 412 - -
Amo10g2843 422 ProSitePatterns Protein kinases ATP-binding region signature. 131 155 IPR017441 GO:0005524
Amo10g2843 422 SUPERFAMILY Protein kinase-like (PK-like) 121 368 IPR011009 -
Amo10g2843 422 Coils Coil 370 399 - -
Amo10g2843 422 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 84 346 - -
Amo10g2843 422 SMART serkin_6 125 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2843 422 Gene3D Phosphorylase Kinase; domain 1 105 220 - -
Amo10g2843 422 ProSiteProfiles Protein kinase domain profile. 125 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2843 Amo-Chr10 93432264 93434388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2843 75 345 MAP Kinase Gene Family AT1G18150 79.930 2.93e-164 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo10g2843 Pkinase 1.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2843 - - ahf:112716487 501.901