Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2813 ATGGCGCAATCTCCTCCAGCATTCTTCAAAGTCCATGAAGTTTACAAAGTTGCGCCGCCACAAGGAACCACCACCACCACAACCACCACCCTTCCCTTAACCTTCTTCGACCTGCTATGGCTAAGGCTTCCCTCCACAGAGCGTCTTTACTTCTACGAATTCCCAAACCCAACTTCTTCATTCTTTGACTCTCTTCTTCCCAATCTCAAACACTCCCTTCAACTCACTCTTCAACACTTCTTCCCCCTCGCCGGTAACATCACTTGGCCGCAACATTCTCTCATTCCTACCATCACCTACGTCCCCGGTCAAGATTCCGTTCCTCTCGTCGTATCCGAATCCAACGAAGATTTCAACCACCTTTGTTCCAATCTTTGCCAAGTTTCCAAGTTCCAACAATTAGTACCTCGCTTGAGTATTTCAGATCACAGAGCTTCTTTGCTTGCGTTGCAAGTAACCGTGTTCCCGAACTCTGGCTTTTGCATCGGAATAACTACTCACCATGCCGCTTTCGATGGAAACTGCTCAACCATGTTCATGAAAGCATGGGCCTATACGTGCTCCCAGATCTCACATACGCCATCGATGTCACTTCCCGAGAATCTAACACCGTTCTTTGACAGATCAGTCGTAAAGGACCCAAAGCGAATCGCCGAGTTGTTCGCGAAGACATGGTTGAACTTCGGTGGAGAAAACAATAGGAGTCTTAAGATCTTGGAGACAGCCACGGAATCAAGAACCGATGTAGTTAAAGGGGTGTTTGAATTGAAGACTTCACAAATTCAAAAGCTCAAGAAACATGCAAAAAGCAGTAACTTGGAAACTAAGGTTTCTACTTTTGCGGTTACTAGTGCTTATTTGTTGAATTGCTTGGTGAAAGCAGAGCAACAAGAGTCCAAGAAAGTTGCATTTTTATTCAACGTGGATTGTAGATCCCGTTTGGAACCTCCATTGCGGCCAACATATTTTGGAAACTGCGTGGCGATTCCGTTGATATCGGTAGAGAAAGAGGGGATAGAAGGGAGTGATGGGTTCATAAATGCTCTGAAGATGATAACAGAGATGTTGTATGATTTGGAGAATAATGATAATGGGGTGTTAAATGGGGCAGAAAATTACATGTTAATGGTGCAATCTGTTGTTGGAGAAGGGAGTAGATTGTACTCACCTTCGGGTTCACCATGGTTTGGGGTTTATGGGGTTGATTTTGGATTTGGAAAGCCTACAAGAGTTGATGTTGCTTCTGTTAATAAGACAGCTTCGTTTTCTCTTTCTGAAGGTAGGAATGTCGATGGTGGAATTGAGATTGGTTTGGCTCTCACCCAAAATCACATGGAGACTTTTGCTGCTCTTTTTCACCAACAAATTGAAACCTTTTAA 1380 0.4413 MAQSPPAFFKVHEVYKVAPPQGTTTTTTTTLPLTFFDLLWLRLPSTERLYFYEFPNPTSSFFDSLLPNLKHSLQLTLQHFFPLAGNITWPQHSLIPTITYVPGQDSVPLVVSESNEDFNHLCSNLCQVSKFQQLVPRLSISDHRASLLALQVTVFPNSGFCIGITTHHAAFDGNCSTMFMKAWAYTCSQISHTPSMSLPENLTPFFDRSVVKDPKRIAELFAKTWLNFGGENNRSLKILETATESRTDVVKGVFELKTSQIQKLKKHAKSSNLETKVSTFAVTSAYLLNCLVKAEQQESKKVAFLFNVDCRSRLEPPLRPTYFGNCVAIPLISVEKEGIEGSDGFINALKMITEMLYDLENNDNGVLNGAENYMLMVQSVVGEGSRLYSPSGSPWFGVYGVDFGFGKPTRVDVASVNKTASFSLSEGRNVDGGIEIGLALTQNHMETFAALFHQQIETF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2813 459 Pfam Transferase family 25 450 - -
Amo10g2813 459 Gene3D - 246 459 IPR023213 -
Amo10g2813 459 PANTHER - 8 458 - -
Amo10g2813 459 Gene3D - 9 237 IPR023213 -
Amo10g2813 459 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 8 458 - -
Amo10g2813 459 SUPERFAMILY CoA-dependent acyltransferases 253 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2813 Amo-Chr10 93111964 93113616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2813 23 448 Monolignol Biosynthesis Gene Families AT5G48930 27.009 5.05e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2813 - - gmx:100800849 481.485