Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2802 ATGAAAGAGATAGATTCATCATCATCAGATCTTGCAGCTGGCCTGGTTTCAAGAACAACAAGAAGTGATGAAAAAGCAATTAGTAAGGGTCCATCACCATCATCATCACATCAATGGCTAAGATTGAAGGATCCGCGGATCGTACGGGTATCAAGAGCGTTGGGAGGAAAAGACAGACACAGCAAGGTTTGCACAATAAGAGGGCTAAGAGACAGAAGGGTAAGGCTTTCAGTTCCCACAGCAATTAACCTCTATGATCTTCAAGACAGGTTAGGGCTCAATCAACCAAGCAAGGTTGTTGATTGGTTACTCAATGCTGCTAAGCATGAAATTGATGACCTTCCCCCTCTTCCCATTCCTCCTTCCAATTTTACCCTTGCTTGTTATCCCTCTCTTCCTACTAATAAATCTAATCATAAAGAGCAGGATAGTAGTAATAATAGTACTAGTGCACATGTTTTGCCTAATACTTTTTTATTACCAACAACAATAAACCATAATCATCATCCTCCTTCATTCTTGGGATTATTGAACACTATGCCATCATCAATTGGTAATCCTTTTTACCAATCAGCTTCTCATGATGATGTTGCTCATCAATTATTGGGGAATAATAATAGTAATAATAATAATAATCTTGGATTTGTGAACCAAACAGATTTACATGGTGGGGTTAATGTTGTAAATTTACCCTTTCAAAACTTAGGAGCTTCTCAAATATTGTGTTGTTCTCCTTCTCCTCTTCAACGTGCGGCGGCCGCGGCGACGACCACCGCGACAACAACACAGTCATATTTTCTCCTTCTTCTCTTTCGCATTATAATAATGATAATGTTGCTGCAGCAATGGAAATAA 855 0.3918 MKEIDSSSSDLAAGLVSRTTRSDEKAISKGPSPSSSHQWLRLKDPRIVRVSRALGGKDRHSKVCTIRGLRDRRVRLSVPTAINLYDLQDRLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSNFTLACYPSLPTNKSNHKEQDSSNNSTSAHVLPNTFLLPTTINHNHHPPSFLGLLNTMPSSIGNPFYQSASHDDVAHQLLGNNNSNNNNNLGFVNQTDLHGGVNVVNLPFQNLGASQILCCSPSPLQRAAAAATTTATTTQSYFLLLLFRIIIMIMLLQQWK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2802 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 144 IPR005333 GO:0003700
Amo10g2802 284 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 21 144 - -
Amo10g2802 284 MobiDBLite consensus disorder prediction 1 39 - -
Amo10g2802 284 Pfam TCP family transcription factor 56 166 IPR017887 -
Amo10g2802 284 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2802 Amo-Chr10 93040927 93042765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2802 39 126 TCP Transcription Factor Family AT3G02150 80.682 1.85e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo10g2802 TCP 5.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2802 - - adu:107471262 494.582