Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2800 ATGTCTAGCAAGAAGGTTTTCACATCAATGAAGGAAGAGAATCCAGATTTGAAGAAGCAGATGGGGTGCATCAGTGGATTCCTTCAGCTCTTTGATCATCGTCACTGGTTCCTTACAAACAACAACTATAATAATACTACTCCACCTGGTGAAACAAGAAATGAAGCCAAAGAGCTGAATAATAAGATGCTAAATGCAATGGCTAACAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACAGAATCATCGGGAACTTCCAACTCATCATCCTCTTGCTCATCTAGCATGTCATCCTTCGAGTTCAACAGAACAATTCTCAGCCAAATCAAGATCCAAGAAAACTCCAATCCAAAAGCAGTAAAACAACCCGACACCCCAGTTCATCAGTCCCTGGATTTCCACGATATTGTCAAAGACTCAATGCAGAGAGAGCCACGAGGGTTATCAGTCAAAACTGCAGCTAAAGAGGAAAAGAAGGGCCGTATCTTGAAACACATCGACTCTCCCCGGCCTTTGCAGTTGCCTAAATCTGTCAATAGCAGAGGCATTGTCACCAATGAACCCCTCCATAATCTTGCTAAGTCTTGGGGAAGGCCATGGGATTCGCCTCGACGCTCTTATGATGAGAGGGAAATGCAACAATTATTAAAGCACAAGGAAATCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCAACAAGAGTTATAGCGGAGCAACAAGATCTCAAAATCTCATGAAGGGTGCAGAGAAAGGATATGAGAGTTCGAGCACAATGCTTAGGCAGCAGCAGCAAGAACCGGAAACTCCTAAGAGAGCATCGAGTGTTGTAGCAAAGTTAATGGGACTGGAAGAACTTCCAGATTGCACACAAGCTTGCGATACTTCTTCGCAGATGTCTTGCATGAGTGATGGATATAACCAACACCAAAGTCCAGTTTCCCCCATAACAAGAAACCAGTGCTTGGGGACTTCTAGAAGGGACAATGCCTTAATCAGAAATGCGACACCAGATTCACGATTTTCACTTGAACCAATCCCATGGAGGCAACCTGATGCAAGCCAAGATCCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTCGACAACAGCTTCAAAACCCTCCCACTCTGTATATGGTGAAATTGAGAAAAGGATTGCAGATCTTCAGTTTAAAAATTCAGGAAAGGATCTCAGAGCCCTTAAGCAGATTCTGGAAGCAATGCAGAGATACAAAGATTCACTAGATATTACAAGAGACCAGGAAACAAATTACCCTTCTGACAGAGGTCTCAGTGAAAGCTCGGAATTACAGACCCCAAGACAACAGACCGACCCAACATTTGTCACTGATGATATTTCAAGTTCACCCCGGGGTAGAAAGTTTCCAATTATCGTCATGAAGCCAGCACAAATCTCAAGGAAATCCAATGTCGCTACCAAAGAAATGACTAATGGCAAATCAGGCCGCATCAAGTTTTCTACCAATGATCCCAAAGATGGAAGATTGCTTGACAATCTTGAAAGTCAAGCCGCAAAAGGAACCGGTCCAACAAATTCATTTAGTCAACGTTTCCATTCTGCAGATAAGAGTAACATGAAGAAAACTTCAAAATTAATGCAAGCCTCAAAAGTCCCTCAGGTCATCAATGGAGAGGACACCAATAACTCCAGCCATACAGCAGAGACTAGAAGCCCAAGAGTACAAAATAAGTTTGGTTTTGAGAAGCGTTCACCTACAAACCAATCATCAGAGTCCAAAAGTAAAAGAAGACAACACAAGCAATCATCAGAGTCATTGTCCCTAAGTTCCACCCCTAAGCAAAAAGTTTGTACCTTGCAGCAAAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAAGAGGAACTTTAAGCATCAAGTTGATGTTATTTCCTCCAATGTTGACAGCAACAGAAGCATGGATTCTCACCGTGATATAGACGGCACCCAATCTGATCATTCTGAAAGCAACAACAGCATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAACAAGGAAAGTGCTACAGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTGCGATTTTACAGTGAAGACCCACCTTCTCCAATTAAAAAGAAGACAGAAACCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTGATAACATAGGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGACGATAATAGCGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCTGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTCATATTTGATGTTGTTAATGAGATTCTAGTACAAAAACTAATATTGGAGAGTCCTTCCACACTCTGGTGCCTGCCAAATCAGCCAGCAGTAGTAGATCGCAAACTGAATGGACGGCAACTTCTGGATGAGCTTTGCACAGAAATTGATAATTTACAACCCAAAAACACAAACTTTGAGTTGGTTGATGAGGTTGCAGAATCGACAAGTCACTTATGGGGAGATTTAATGCATCAACCCACAATTTCAACAGAGTGCAACACCGAGATACCAAATGTTGTGTTGGATATTGAACGCTTGATCTTTAAAGATTTGATTACAGAAGTTGTGAGAGGTGAAGTAGCTAACTATCCAGGTAGGCATTGCAGGCAACTGCTGTTTCCGAAGTAG 2988 0.4177 MSSKKVFTSMKEENPDLKKQMGCISGFLQLFDHRHWFLTNNNYNNTTPPGETRNEAKELNNKMLNAMANNNVKVARENQQFSTESSGTSNSSSSCSSSMSSFEFNRTILSQIKIQENSNPKAVKQPDTPVHQSLDFHDIVKDSMQREPRGLSVKTAAKEEKKGRILKHIDSPRPLQLPKSVNSRGIVTNEPLHNLAKSWGRPWDSPRRSYDEREMQQLLKHKEIPRLSLDSREGSNKSYSGATRSQNLMKGAEKGYESSSTMLRQQQQEPETPKRASSVVAKLMGLEELPDCTQACDTSSQMSCMSDGYNQHQSPVSPITRNQCLGTSRRDNALIRNATPDSRFSLEPIPWRQPDASQDPDLQVSKGSETSTTASKPSHSVYGEIEKRIADLQFKNSGKDLRALKQILEAMQRYKDSLDITRDQETNYPSDRGLSESSELQTPRQQTDPTFVTDDISSSPRGRKFPIIVMKPAQISRKSNVATKEMTNGKSGRIKFSTNDPKDGRLLDNLESQAAKGTGPTNSFSQRFHSADKSNMKKTSKLMQASKVPQVINGEDTNNSSHTAETRSPRVQNKFGFEKRSPTNQSSESKSKRRQHKQSSESLSLSSTPKQKVCTLQQRNEGFSKIRCQKRNFKHQVDVISSNVDSNRSMDSHRDIDGTQSDHSESNNSISIQQVTHMNQNTATKELNKESATAMITVTSEQQSPVSVLDLRFYSEDPPSPIKKKTETSKDLDEALATPDNIGHALDLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNDDNSEKFTNCRERKDSDRKYIAEILLASGLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKLILESPSTLWCLPNQPAVVDRKLNGRQLLDELCTEIDNLQPKNTNFELVDEVAESTSHLWGDLMHQPTISTECNTEIPNVVLDIERLIFKDLITEVVRGEVANYPGRHCRQLLFPK* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2800 995 MobiDBLite consensus disorder prediction 481 612 - -
Amo10g2800 995 Pfam Domain of unknown function (DUF4378) 798 974 IPR025486 -
Amo10g2800 995 MobiDBLite consensus disorder prediction 337 380 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 639 667 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 297 323 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 514 530 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 537 570 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 585 599 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 358 379 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 481 495 - -
Amo10g2800 995 PANTHER LONGIFOLIA PROTEIN 3 994 IPR033334 GO:0051513
Amo10g2800 995 MobiDBLite consensus disorder prediction 231 274 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 427 457 - -
Amo10g2800 995 PANTHER LONGIFOLIA PROTEIN 3 994 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 221 277 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 420 459 - -
Amo10g2800 995 Coils Coil 404 424 - -
Amo10g2800 995 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2800 Amo-Chr10 93024767 93029207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2800 131 990 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.610 9.21e-73 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2800 - - ahf:112783057 1871.29