Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2763 ATGGGTGCAAGGAAATGTTGTTGGATACTATTCAAACAGAAAAAGAAACCCAAAGAAGATAACTCCCAAGAAGAAAAGGTAAACCCTACCGAAGAAAAGATAAACGAAGAATCGTTGAATGGAAAGCAAAGCAGTAATGAAGAGTCAAGTAGCATGATCCCTAATGAAGGTGGTTTGATAATGGACAGAACAGTTCCTTCAAGGTTGATTGATAATATTGCTGCTACAAGGATCCAAAATGCATTTCGCTCTTTTATGGCAAGAAGAACATTAAACCATCTAAAGGGGGCAGAGAAATTTGAAGCTTTGATTCAAGATCACCTGGCCAGAGAGCAAACAGCAACTGCATTAAGCTATATACATTCATGGAGCAGAATACAAGACGAGATTAAAGCTCGCAGAATCTGTATGATAACAGAAGCTCGTGTTAAGCAAAGGAGATTGGAAAGCCAGCTAAAACTCGAAGCTAAGATTCATCAGCTAGAGGTGGAATGGTGCGGCGGTTCAGAAACAATGGAAGAGATAATTTCAAGGTTATATCAGAGAGAAGAAGCCGCAATTAAACGAGAGCGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAACTGTAGCCAATATTTCGGTCAGGCTTCGTATAGTCTCGGTAAGGAAAGCTGGGGTTGGAGCTGGACGGAGCGTTGGGTTGCGGTGCGTCCTTGGGAAATCCGGGTACGAGTTCATACCTCCAAGGTAAAGAAACTCAATAGCCTGCACCAAAAGTCCAAGTTAGATAAGATGGACGACAACAAGAGCAAAGGAAAAGAAAACGACACTTCGGAGTTGTCAAATAACTATATTTTGGATTGGGATAGCCCGCGTGGCCATCACGGCCCCAGCAAGCAGAGAGAGGGGGGCTCTGACCGCGGGCAGTCTTCATCGCAGATTCCGACACAGCGGAAGGCCGCTCCTCCGTGTCCATCTCTTCTCGGGGCAGAGCCGCCTGCAACTACCTCCAAGGGAGGAAGAAGGGTTGCTCCGCCCCCGCCCCTCGCTGCCGCATTGGAAGAAGGGAGAGTTGTTCGGAGAAGGCAGAGGTCGTCTTTTCCTTGCCGTCGCACGAAGGGTTGCTGGTCCGTCGGTCATCGTCTCTTCAAGCTTTCTGTCTCTCTCTTTGAGCTCGTTTTCCTGTTCAAGCTCTCTCTCGTTCTCTCTGTCCAAGTTCACTTCTCTTCTCTGTCGCCATCACTTCCTTCCTTCTTCGCCGTCGTTAAAACAGGAAACCCTAGCTTCCCCACCACCGCCGCAAGGGCTGCCGCCGTCCGTCGCGCCCAGGCACTACCATTGTCGTCTGGTCGTTCGTGCTTCTTCTTCCTTCAAGAATCGCAGCTTCTTCCTCGAGCTCGGCGCGTCAGTCCCTGGTATTCATCAGCTCCGTCGCGCCCTCAGGCACCATCGTCTTCGTCTAGTCGTCGTGCTCGAAGTCCCCAACCCACCAATTGCAGCTTCTTGCTCGAGCTTGGAGTCTTTGAGTCTACTCTTCGTTTGCTCAGCCGCAGGTTCTTCCAACCACCATCTTCTGAGTCGTGTTTGTCGCCTGGCCTCTGTCTCCGTCGCGCTTCTGCCCCTTTGCTCAGAAGAAAAACCCTTCTCCATTCCAATTTTCTTCCTTCGAGTTCAGAGAGCAGAAGCTCAACCAAGAAAAAAACCCTAGACTTCGAAGGAACCATTTTTTGCAATGGGGCTATTCAATATCTCTCAGAGCTCCAGATACTGAAAATTCACAGTTGCTTTAGATTAGAAGAACTTATTCTAGTCACAGAGATCGGTGAGAATGTTCTTCCAAAACTGGAGGTGCTGCTGCTAGCTAACTTGCCAAGACTCAGATTTGTAACCATAGACATGACATTGAGATGGTCCTCTCTAGAGCAAGTAAATATATACAGGGTGGCTTGCTTGAGGAATAATGACCTCTGGAAGAAGTTTGAGGAGGAGTTTGGGGAAGCTGGGAGTAGAGTGAAGTTCTTTAAGGAATATTTTGCTTTACACTGGGAATCAAAGAAGAGATCAATGCAACCGGATTTTTATGCATTATTTCGGCAAGAAGAGATCTTAATCCTTTTGGAAATTTTTTATTTTTTCGACTACGGTTGGACCATTGAACCATTGAATCAATCACTTGACCGCATCGACGGTGTGGCGCACGTGTTTGAAGGAATGGTGCCAACCCGAATAGCTTCTCTGTCTCGTTTTCGCCTTCATCAACACATGGTTAGTGCCACAAACCTTGATGATCATGATGATTGTGAGAGGAATAACAAAAGAAACGACTTCAGGAACTCCTTGATAGACAAGTGTAAGCTTGGTAAACTGAGTAATGTTGGGGAAGCTTTTGACTTGTTTCATTCTATGGCTATGATGAAGCCTTTGCCATCTGTGTTTGACTTCACTTTGTTGTTGGGTGTGATTGTGAGGATGAAGCATTACACAACTGTGATATCTTTGGTTCAATACATGTATTCTTCTTTGGGCATAAAACCTGATTGCTTTACTCTTAATATTGTGATTAATTGCCTTTGTCGAATAAAGTTGACGCCTTTCGGGTTCTCTGTTTTTGCGAGCATGCTCAAGCTTGGATTGGAGCCACCTCTGTCACTTTCACTGCTCTCATTAATGGGCTTTGCATGCAAGGCGATGTGGCTCGGGCAGTGGGGAGTTGAAAGTTTGAAAAGCATGGGTTATCAATTGGATGTTTACACTTATGGAGCCTATTGGTGGCTACATAAGATGGAAGAAAGAGATTGTAGATCCAATGTTGTAGTTCACAGCACAATTATTGATAGTTTGTGCAAGGATGATTGCAAAGGTATTAAACCAAATATCGTCACATACAGTTGTTTGATTCAAGGTCTTTGTAATTTTGGCAGATGGAAAGATGCTGCTTCCCTGCTGGATGAGATGATGAAAGTGGGGATGATGCCAGATTTGCAAACTCTAAATATTTTAGTGGATGTTTTCTGCAAAGATGGAAAAGTTATGCAGGCTAAGAGTGCAATTGGATTTATGATTCTGATGGTTGGTCGACCATTGGCTGCAAAAGAACTCTTTTTTAGTATGCACAAACATGGCCAGATGGCCAATCTCCAGACTTGTGCTGTTATGTTGGATGGTCTATGTAAATGCCAGCTTCTTTCCGAGGCAACATCGTTGTTTGAATTAATGGAGAAGAGTGGTCTGGATCTTAACATTGTGATTTATAATATTATGCTTGATGGAATGTGGGCCGTTGGAGAAGTAAAGGGGGCATGGAAACTTTTTTCTTCTTTGCCTGCTAAAGGTCTGCAAATTAATTTGTATACTTATAAGTTATAA 3354 0.4484 MGARKCCWILFKQKKKPKEDNSQEEKVNPTEEKINEESLNGKQSSNEESSSMIPNEGGLIMDRTVPSRLIDNIAATRIQNAFRSFMARRTLNHLKGAEKFEALIQDHLAREQTATALSYIHSWSRIQDEIKARRICMITEARVKQRRLESQLKLEAKIHQLEVEWCGGSETMEEIISRLYQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAVRPWEIRVRVHTSKVKKLNSLHQKSKLDKMDDNKSKGKENDTSELSNNYILDWDSPRGHHGPSKQREGGSDRGQSSSQIPTQRKAAPPCPSLLGAEPPATTSKGGRRVAPPPPLAAALEEGRVVRRRQRSSFPCRRTKGCWSVGHRLFKLSVSLFELVFLFKLSLVLSVQVHFSSLSPSLPSFFAVVKTGNPSFPTTAARAAAVRRAQALPLSSGRSCFFFLQESQLLPRARRVSPWYSSAPSRPQAPSSSSSRRARSPQPTNCSFLLELGVFESTLRLLSRRFFQPPSSESCLSPGLCLRRASAPLLRRKTLLHSNFLPSSSESRSSTKKKTLDFEGTIFCNGAIQYLSELQILKIHSCFRLEELILVTEIGENVLPKLEVLLLANLPRLRFVTIDMTLRWSSLEQVNIYRVACLRNNDLWKKFEEEFGEAGSRVKFFKEYFALHWESKKRSMQPDFYALFRQEEILILLEIFYFFDYGWTIEPLNQSLDRIDGVAHVFEGMVPTRIASLSRFRLHQHMVSATNLDDHDDCERNNKRNDFRNSLIDKCKLGKLSNVGEAFDLFHSMAMMKPLPSVFDFTLLLGVIVRMKHYTTVISLVQYMYSSLGIKPDCFTLNIVINCLCRIKLTPFGFSVFASMLKLGLEPPLSLSLLSLMGFACKAMWLGQWGVESLKSMGYQLDVYTYGAYWWLHKMEERDCRSNVVVHSTIIDSLCKDDCKGIKPNIVTYSCLIQGLCNFGRWKDAASLLDEMMKVGMMPDLQTLNILVDVFCKDGKVMQAKSAIGFMILMVGRPLAAKELFFSMHKHGQMANLQTCAVMLDGLCKCQLLSEATSLFELMEKSGLDLNIVIYNIMLDGMWAVGEVKGAWKLFSSLPAKGLQINLYTYKL* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2763 1117 MobiDBLite consensus disorder prediction 15 38 - -
Amo10g2763 1117 TIGRFAM PPR: pentatricopeptide repeat domain 1044 1076 IPR002885 -
Amo10g2763 1117 TIGRFAM PPR: pentatricopeptide repeat domain 844 876 IPR002885 -
Amo10g2763 1117 TIGRFAM PPR: pentatricopeptide repeat domain 956 989 IPR002885 -
Amo10g2763 1117 Gene3D Tetratricopeptide repeat domain 945 1016 IPR011990 GO:0005515
Amo10g2763 1117 MobiDBLite consensus disorder prediction 252 272 - -
Amo10g2763 1117 MobiDBLite consensus disorder prediction 470 491 - -
Amo10g2763 1117 Pfam PPR repeat 1047 1073 IPR002885 -
Amo10g2763 1117 Pfam PPR repeat 844 874 IPR002885 -
Amo10g2763 1117 PANTHER IQ-DOMAIN 10 14 278 - -
Amo10g2763 1117 MobiDBLite consensus disorder prediction 252 353 - -
Amo10g2763 1117 Gene3D Tetratricopeptide repeat domain 768 918 IPR011990 GO:0005515
Amo10g2763 1117 MobiDBLite consensus disorder prediction 468 491 - -
Amo10g2763 1117 MobiDBLite consensus disorder prediction 15 58 - -
Amo10g2763 1117 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 842 876 IPR002885 -
Amo10g2763 1117 Gene3D Tetratricopeptide repeat domain 1017 1117 IPR011990 GO:0005515
Amo10g2763 1117 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 954 988 IPR002885 -
Amo10g2763 1117 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1076 1110 IPR002885 -
Amo10g2763 1117 MobiDBLite consensus disorder prediction 39 53 - -
Amo10g2763 1117 MobiDBLite consensus disorder prediction 299 315 - -
Amo10g2763 1117 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1041 1075 IPR002885 -
Amo10g2763 1117 PANTHER IQ-DOMAIN 5-RELATED 14 278 - -
Amo10g2763 1117 ProSiteProfiles IQ motif profile. 71 99 IPR000048 GO:0005515
Amo10g2763 1117 Pfam PPR repeat family 1076 1115 IPR002885 -
Amo10g2763 1117 Pfam PPR repeat family 953 1002 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2763 Amo-Chr10 92400768 92409564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2763 67 245 IQD Protein Family AT3G15050 60.894 2.24e-74 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2763 - - adu:107459847 557.37