Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2759 ATGAGTTTTCCAGTCACTTCCGGCGCCGCCACCGCCGTGGTGGGGGTCGCCTCGTCCGGCCGCCGCGGCATCGGACTGTCGAACACTATCCACTCCGAGGTTGCTCCCTGCCTGCCGCTGCCTTCTCTTCCGGTGTTCTGCGGCTCCTCCGATCGGGACCTCCGCCTAGTTGACTCGCCAGCGATGCTGAACCGTGTCGACGTGCTCGCACAGGCTGGAAAGATCGCTGAGCTGCTCCAGCACACCGATGTGTCGTACTTAAACTTAAGAGATGATAACAGCAGTGGTTCGTATATGTACATTGAGCCATTGGAACTCCATGATGAGGTTCTCAGGTGCAATCCTGAAGCATTTGAATACAGTACCACAGGTCCTGTCAAGGAGCAGATCTCTGGTCGTGCGGTGGGTGAGAAGAAGCTCCGTGAGTCAAGTCTTCCTGGCATAAATCAAACTAAAGAAGACTACAATGCAACCCCTAATCGTCAACATGACCATTTTTCTTCAAATGACATTTCAACGTTATCTTCCAAAAAATCAAAAGTAAGGAAGAAAGGAGGCGATGGAATTTCCGTAGGGCCCAGTTCTGCCGAGCTTCAAGATGCAACCATTGGAAGGTTTCGTGAGTTTTTGGAAGACTTATGCAACAAAGCTGAAGTTCAGACTGATGATCGAGATGAAGCAGAATGGCTGCCATTGTCACTTTCAGATCTTAGATTGCTTGTTAATGAAATAATGTCTATACATGAGAAGAAACTAATGCATATTGTTCCTGTTGAAGTCCTTGTGAGGATACTGAATGTTCTAGATCATCAAATACATAGGGCAGAAGGCCTGTCAATTGAGGATTGTGATAATTCAGACTCGGAACTAATTTCATCTATTTTGATCGCATTGGAGTCCATTCATGCTGCACTAGCTGTGATGGCTCACACTGAGATGCCGAAGCAAATTTATAAAGAAGAGATCATTGAGAGAATTTTGGAGTTTTCCAGGCGTCAAATAATGGATGTTATGTGTGCAAGTGATCCATCGTATCGTGCGTTACACAGACCTAGTGAAAACACTGCATGTGAAGTTGATGATTATTATGAAGAAAATGATGCAGAATTTGGTTCGGCAAGCAAGAAACGTCGTACCAGCAAGAGTACAAAGATGAGGAAATCAACATCAAACAGGGTTTCTTCTGCTGTGAATACTATCCTTCAGAAATTATGCACTGTTCTTGGATTGCTGAAGGATTTGTTGTTAATTGAGAGGTTATCAGATAGTTGCATTCTTCAACTTGTAAAAACAAGCATTACAACATTCATGGTTGAGAATATCCAGCTTTTGCAGCTGAAGGCAATTGGTTTACTTAGCGCGATATTCTATTTATACACACAACATCGCACATATGTGATAGATGAAGTGCTTCAGCTTCTTTGGAAATTACCATATTCAAAACGAGCTATAAGAGCCTACCACATACGCGAGGAAGAGCAAAGACAGATCCAGATGGTTACCGCTTTGCTGATTCAGTTAATTCACTGTAGTGCTAACCTTCCAGATGCTTTAAGACAAGCATCAAGTGGTAATGCTGTGTTGGAAGTCTCGGTTGACCCTAATGATCCAACTAAAGGCCATGAAGCCACAACAGAAGCTTGCTGTCTATTCTGGAGCCGTGTACTTCAGCGGTTTGCAAGTGTGAAGACCCAGGATGCTTCAGAGCTGAAATCCATAATGGAGAATCTTGTTACTGATTTACTCACAACTTTAAATTTGCCCGAGTATCCTGCTTCAGCTCCCATTTTGGAGGTTCTCTGTGTCCTACTACTTCAGAATGCTGGGCCGAAATCTAAGGATGTCTCTGCACGTTCCATGGCTATTGATATTCTTGGTACAATTGCTGCAAGGTTGAAGCGTGATGCTTTGGTTTGTAGCCAGGAGAAGTTCTGGATACTTCAGGATTTACATGGTCAGGATAGTGCTAATCAGCAATATCCAAAAGATTCTTGTTGTGTCTGTATGGATGGCAGTACCGACAATTTATTGATATGCCATGGCTGCCAGAGACCCTTCCACACTGACTGCCTGGGTATTAAAGAACATGAAGTTTCCAACTGGAACTGGTACTGTCAGACATGCATCTGTCATAAGCAACTGCTTGTATTACAGTCATATTGCAATTCCCGGTGTAAGGATGACGTGACAAAGAAACGTAATGCGTCAAAAGATTCTGAAATTTCAAAGCATGAAATTGTTCAACAGTTGCTCTTGAATTACCTTCAAGATGTCACTTCTGCTGATGATATCCATCTGTTCGTTTGCTGGTTTTATCTCTGCCTGTGGTACAAAGATGATCCTAATTGTCAGCGAAAGCCTATATACCACCTTGCTAGAATGAAATCAAGAATCATTGTACGGGACTCTAGTACCATCTCATCCACGTTGACGAGGGATTCAATTAAGAAGATTACTTTAATTTTGGGTCAAAACAGTTCATTTTGTCGAGGGTTTGATAAGATTCTTCACGTGCTTCTGGCAAGCCTGAGGGAGAACTCTCCAGTTATCAGGGCTAAGGCTTTACGAGCTGTTAGTATCATTGTAGAGGCTGATCCAGAGGTATTGGGTGATAAACGAGTACAGTCAGCTGTTGAAGGAAGGTTTTGTGACTCTGCAATTTCTGTTAGAGAAGCAGCATTGGAACTTGTCGGCAGGCACATTGCTTCACATCCAGATGTGGGTTTTAAGTATTTTGAAAAGATCGCTGAGAGAATCAAGGATACTGGAGTTAGTGTTCGAAAACGAGCAATAAAACTTATTCGAGACATGTGCAGTTCAAATGTCAACTTCTCTGGCTATACTAGGGCTTGCACAGAAATAATTTCACGCATTAGTGATGATGAGTCAAGTATCCAGGACCTTGTTTGCAAAACGTTTCATGAGTTCTGGTTTGAGGAGCCTTATGGTTCACAAACTCAGGTCTTTGGAGATGGTAGTACTGTTCCACTCGAGGTGGCTAAGAAAACAGAGCAAATTGTTGAAATGCTCAGGAGAATGCCCAACAATCAACTTCTTGTAACTGTAATAAAGCGCAACTTATCACTTGATTTTTTGCCCCAAGCTGCAAAAGCTGTTGGTGTCAACCCTGTGTCCCTTGCTACAGTGCGTAAGCGCTGTGAGTTAATGTGCAAATGCTTGCTGGAGAAGATATTGCAGGTTGAGGAAATTAATAGCAATGAAGTGGAGGTGCATGCTCTACCATATGTGCTGGCCTTGCATGCATTTTGTCTTGTGGACCCAACTCTCTGTGCACCTGCTTCAAACCCATCCCAGTTTGTTGTTACTTTGCAGCCATATCTTAAAACGCAGGTTGACAATCGCATGGTTGCACAGCTAGTTGAGAGTATAATCTTTGTAATTGATGCTGTGTTGCCTTTACTTCGGAAGTTACCTCCAAATATTGTTGAGGAGCTAGAGCAAGATTTGAAACATATGATTGTCCGGCATTCTTTCTTGACAGTAGTCCATGCTTGTATCAAGTGCCTCTGCTCTGTAAGCAACATAGGCAGTAAAGGGGCTGCTGTGGTGGAGCATCTTATTCAGGTCTTCTACAAATGTTTGGACAATAAGCAGCAAGTTGGGCGATCACTCTTTTGTCTTGGATCACTCATTCGATATGGCAATTCTTTGTTGGTAAGCTCAAGCAATAAAGTTATTGATGTCAGAAGGAGTCTTACCTTGTGTATAAAGTTTCTCTCTGAGGAGGATTTTGTTGTTAAGGCTAGATCATTGCAGGCACTAGGGTTTATTTTAATTGCCAGGCCTGAATACATGTTGGAAAAGGATATTGGAAAGATACTGGAGGGAACATTATCTTCAAATGCTGACATTCGTCTTAAGATTCAAGCATTGCAAAACATGTTGGAGTATCTCCTTGATGCTGAAAGCAAAATGGGAACAGATAAACCTGATGATAACGTAACTGGTTACACAGTTGGAGCTGTGCAGAGTGTACCCGTTGCTGCTGGAGCTGGGGACACAAACATATGCGGGGGTATAATTCAGTTATATTGGGATAATATTTTAGGCAGATGTTTGGATTCCAATGAACAAGTCCGCCAATCAGCTCTGAAGATAGTTGAAGTTGTGTTGCGCCAAGGTCTTGTTCACCCAATCACTTGTGTTCCATATCTAATAGCACTTGAAACTGATCCTCTGGAGTCAAATGCAAAGCTGGCTCATCATCTCCTAATGAATATGAATGAGAAGTACCCTGCATTTTTTGAAAGTCGTTTGGGTGATGGACTTCAAATGTCATTTATTTTCATGCAATCAATTAGCACTGCTTCTGAAAATGGCAATCAGAAAATCCCATCTAAAATCCCTGTATCTGGAAAAGGGAAACCCGAAACTGTCTCACTAGCTCAAGCAAGACTTGGTGTTTCTAGAATATACAAGCTCATCCGGGGGAACAGGAATTCAAGGAATAAATTTATGTCATCAATTGTGCGAAAATTTGACAATCCAAAGTGGAGCCATTCAGTAATAGCTTTCTTATCATACTGCACAGAGGTCCTTGGATTGCTGCCTTTCATTTCCCCTGATGAGCCCCTTTATCTAATATATGCCATCAATCGAATAGTTCAAATTAGGGCTGGGCCACTAGAAGCGAATTTTAAAGCCTGGAGTTCAAGGTTATCAAGAAATGAGAATCAAAGTACACCGAATGGGAATGGAATGTATCAACAGGAGACAGACAAGTCCACTATTATAACCCAAGGAACATCAATGGATTTGAATGGAACATTTCAGCAAAATCTAGATGCTCGTCCAGATTTGAATGACATGAGATCAGTGGATTTAAATGGAACATTCTACCAACAGCCAGATGATACTTTATCGAATAATGGCAGCTCCGAACCAAAGCCGCATGCTGTGGGTTCTGATTATTTTGCCTTCTCAAAAGATGATCTGGAGAGAGTTCAGGCAGACTGCTTATCAGCAATTGCACTGCAATTTCTCCTAAAATTGAAGAGACATCTGAAAATCATGTATAGTCTCAATGATGCTAGATGTCAGGCATATTCACCAACTGAACAGCCAAAACCTGGAGAAGTTATCTCCAGACAGAATATCCCATTTAATATTAGTGAAACTCAGTTCAGCGTGCCTTCAAATCCACAAGAATTAATACAGAGATACCAGGAATTTAAGTATGCATTGAGGGAAGATACGGTGGATTATTCACTGTACACTGCAAATATAAAACGGAAGCGACCTACACCCAGAAAAGTTCGGAGATCTGCACCCATGGCTAGTGGGGACTTAGAGGATGATGATGATGATGATGATTGGGGTGGTGGAATGCGCAAGATAACAAGTAGTGGTGGCCGTAGAGCTAACCTTAGAAGCAGCAGTAGGCAATATTGA 5412 0.4231 MSFPVTSGAATAVVGVASSGRRGIGLSNTIHSEVAPCLPLPSLPVFCGSSDRDLRLVDSPAMLNRVDVLAQAGKIAELLQHTDVSYLNLRDDNSSGSYMYIEPLELHDEVLRCNPEAFEYSTTGPVKEQISGRAVGEKKLRESSLPGINQTKEDYNATPNRQHDHFSSNDISTLSSKKSKVRKKGGDGISVGPSSAELQDATIGRFREFLEDLCNKAEVQTDDRDEAEWLPLSLSDLRLLVNEIMSIHEKKLMHIVPVEVLVRILNVLDHQIHRAEGLSIEDCDNSDSELISSILIALESIHAALAVMAHTEMPKQIYKEEIIERILEFSRRQIMDVMCASDPSYRALHRPSENTACEVDDYYEENDAEFGSASKKRRTSKSTKMRKSTSNRVSSAVNTILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITTFMVENIQLLQLKAIGLLSAIFYLYTQHRTYVIDEVLQLLWKLPYSKRAIRAYHIREEEQRQIQMVTALLIQLIHCSANLPDALRQASSGNAVLEVSVDPNDPTKGHEATTEACCLFWSRVLQRFASVKTQDASELKSIMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALVCSQEKFWILQDLHGQDSANQQYPKDSCCVCMDGSTDNLLICHGCQRPFHTDCLGIKEHEVSNWNWYCQTCICHKQLLVLQSYCNSRCKDDVTKKRNASKDSEISKHEIVQQLLLNYLQDVTSADDIHLFVCWFYLCLWYKDDPNCQRKPIYHLARMKSRIIVRDSSTISSTLTRDSIKKITLILGQNSSFCRGFDKILHVLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMCSSNVNFSGYTRACTEIISRISDDESSIQDLVCKTFHEFWFEEPYGSQTQVFGDGSTVPLEVAKKTEQIVEMLRRMPNNQLLVTVIKRNLSLDFLPQAAKAVGVNPVSLATVRKRCELMCKCLLEKILQVEEINSNEVEVHALPYVLALHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLVESIIFVIDAVLPLLRKLPPNIVEELEQDLKHMIVRHSFLTVVHACIKCLCSVSNIGSKGAAVVEHLIQVFYKCLDNKQQVGRSLFCLGSLIRYGNSLLVSSSNKVIDVRRSLTLCIKFLSEEDFVVKARSLQALGFILIARPEYMLEKDIGKILEGTLSSNADIRLKIQALQNMLEYLLDAESKMGTDKPDDNVTGYTVGAVQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDSNEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFMQSISTASENGNQKIPSKIPVSGKGKPETVSLAQARLGVSRIYKLIRGNRNSRNKFMSSIVRKFDNPKWSHSVIAFLSYCTEVLGLLPFISPDEPLYLIYAINRIVQIRAGPLEANFKAWSSRLSRNENQSTPNGNGMYQQETDKSTIITQGTSMDLNGTFQQNLDARPDLNDMRSVDLNGTFYQQPDDTLSNNGSSEPKPHAVGSDYFAFSKDDLERVQADCLSAIALQFLLKLKRHLKIMYSLNDARCQAYSPTEQPKPGEVISRQNIPFNISETQFSVPSNPQELIQRYQEFKYALREDTVDYSLYTANIKRKRPTPRKVRRSAPMASGDLEDDDDDDDWGGGMRKITSSGGRRANLRSSSRQY* 1804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2759 1803 PANTHER EXPRESSED PROTEIN-RELATED 22 1790 - -
Amo10g2759 1803 MobiDBLite consensus disorder prediction 144 175 - -
Amo10g2759 1803 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 22 1790 IPR033031 GO:0003682|GO:0010468|GO:0061780
Amo10g2759 1803 ProSiteProfiles Zinc finger PHD-type profile. 662 711 IPR019787 -
Amo10g2759 1803 Pfam Sister chromatid cohesion C-terminus 1344 1541 IPR024986 -
Amo10g2759 1803 MobiDBLite consensus disorder prediction 1753 1803 - -
Amo10g2759 1803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 648 716 IPR013083 -
Amo10g2759 1803 Gene3D - 1032 1420 IPR011989 -
Amo10g2759 1803 Gene3D - 798 976 IPR011989 -
Amo10g2759 1803 MobiDBLite consensus disorder prediction 132 194 - -
Amo10g2759 1803 SUPERFAMILY ARM repeat 831 1537 IPR016024 -
Amo10g2759 1803 Pfam HEAT repeat associated with sister chromatid cohesion 856 897 IPR026003 -
Amo10g2759 1803 SMART PHD_3 664 709 IPR001965 -
Amo10g2759 1803 ProSitePatterns Zinc finger PHD-type signature. 665 708 IPR019786 -
Amo10g2759 1803 SUPERFAMILY FYVE/PHD zinc finger 663 716 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2759 Amo-Chr10 92283460 92298290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2759 663 708 PHD Transcription Factor Family AT5G12400 44.681 1.74e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2759 K06672 - gmx:100792021 2809.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3414 20 143465388 143467284 Amo10g2759 10 92283460 92298290 hybridization