Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2739 ATGAAAAATATTGATCGGTGTTTCCGACGAGAAAGGGAGCTTTCCGCTGCGACGATAACCAACTTTACCCTCTCTCCAACTCCAATTCTCAATCCCGCACTTCCTCACCTCCAACCTAAAGCCCTAATCTCTTCCCTCACCTCCTCCACTTTCTCTTCTTCCTCCAAGCTTGATTCGCTCTACCAACTCACTCAACTCGCCAAGCGCAACTCACTCTTCCATCGCCGTTTCACTAACTCGAAAATTAATGCTCTTTTTTTGCTTCTCAATCTCAACCTTGATGACCACAACAAGGTTGGATTTGTCACTGAGGGAGTCGTTGCCCGCCTCGTCGGACGGAAAGGAGAGAGAGAAAAAGGAAGCTGCAACGACCCTCTATGCTCTCTCTCAGCTGTTGAGGTTGTTGGAGTTCATGTAAAGTGGAAGGAAGGGAGGGAGCATATAGAGAGGTTTCATGGATGTGTTCAGATTACGAGAAATGGACGAGATGTGAAAACGCCATCATCGCAGCTGTAA 516 0.4748 MKNIDRCFRRERELSAATITNFTLSPTPILNPALPHLQPKALISSLTSSTFSSSSKLDSLYQLTQLAKRNSLFHRRFTNSKINALFLLLNLNLDDHNKVGFVTEGVVARLVGRKGEREKGSCNDPLCSLSAVEVVGVHVKWKEGREHIERFHGCVQITRNGRDVKTPSSQL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2739 171 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 30 112 - -
Amo10g2739 171 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 131 158 - -
Amo10g2739 171 PANTHER U BOX DOMAIN-CONTAINING 131 158 - -
Amo10g2739 171 PANTHER U BOX DOMAIN-CONTAINING 30 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2739 Amo-Chr10 92051596 92052250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2739 36 134 U-box Gene Family AT4G21350 37.815 1.26e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2739 - K08898 aip:107646845 116.316