Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2729 ATGCTCCGTCAGTGGCGCCTCTCAGCCTTGCACCGCCGTCGCACCGAAGCTCCGTCACACTCCTTCCCGGATCTTCTCCCTGTGTTGCTCGCGTCTCTCCTTTCAAACCCTAACCTGCAATCTGCTAATTTAGCCAAAGTTTGGAGATCTTCTCTGTCACACTCTCTTCGTTCCTTCTCCTCCTCCGCCGCCGCCTCTGCTGCCATTGACCCGAAGGAGGCTGAGGCGAAGCTGGCGATGCTCCGAAGTGGCTACACGAAGCAGGTGAAGGAGGTTCGCAATCTGTACATCCACGAAATGGAGCTGCTTCAGATCGAGAAGGAGCTCAAGGACGAAGCTTGCAGAGAATCCCTTAGAGTTGCCAATGAGGAGCGCAAGAAGCTCAAGGCCGAAGCTGCGCAGATTAGGGCTCCGAAGCGAATTAAAGATCGCACAACAAGAATTCAGAGAAACACTCGTGCGTTTTTCTTTTTCTTCTTCCTTTCCCTCTATGAATTTCGCTGTGCACACCAAGTGTTCGATGGTTTGCTTATTTGTTGGTTTGAGCTAACATGCACATCAAATCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACATTTTAAGTGCAATTCCTTCAGATCTTAATAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGTAGGATTTGTGAAAACTGACAAAGATTTTCAACAGAAAACTAATTATTTCTCTTTTGTGTGGCAAATTGAAGTACTTCTGGAATATTCTGAGTATTGCCAAATGCGCTTGCACATGCCCAATTCCAGAAATTATGTTGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCACTTAAGATTGAGTATCCTGAGAATGTTCACCTGATACGTGGTAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGACTGCATTGAAAGGATGTTAAATCTAAAAAGTTGTAAGCACTCCAAATCATTGAAAAAGAACTTCTCTCAAGAGCTTCAAAAGCTTGAGGAGTATCGCATGAACCAGAAATCCATTGATTCAATGGGTGATTACATCAAAGGCCAAGTAATAGGGTATCTGGATCAGTTTGGCACTTCACTTCCTGTTAAGATTCGAGACTATAAAAAAGACTGGAAATTGCAAGTAAATCAACTTGTTGCTGGAAATTATTACCCTGTATTTTTTTTGTTTCATATCAACCTTGGGATTTACCTGAAAGATAAAAGTAAAGAGCTCTTTATATTGGTAGATAGTTGGGATCTATGGAAATCATTACTCCTTGCCTTGTATATTAGAATTGTTCCTAGTCCTAGTCCTAGAAATTGA 1374 0.4279 MLRQWRLSALHRRRTEAPSHSFPDLLPVLLASLLSNPNLQSANLAKVWRSSLSHSLRSFSSSAAASAAIDPKEAEAKLAMLRSGYTKQVKEVRNLYIHEMELLQIEKELKDEACRESLRVANEERKKLKAEAAQIRAPKRIKDRTTRIQRNTRAFFFFFFLSLYEFRCAHQVFDGLLICWFELTCTSNLFDGHNGTAAAIYAKENLLNNILSAIPSDLNRDEWIAALPRALVVGFVKTDKDFQQKTNYFSFVWQIEVLLEYSEYCQMRLHMPNSRNYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIDCIERMLNLKSCKHSKSLKKNFSQELQKLEEYRMNQKSIDSMGDYIKGQVIGYLDQFGTSLPVKIRDYKKDWKLQVNQLVAGNYYPVFFLFHINLGIYLKDKSKELFILVDSWDLWKSLLLALYIRIVPSPSPRN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2729 457 PRINTS Serine/threonine phosphatase family signature 271 298 IPR006186 GO:0016787
Amo10g2729 457 PRINTS Serine/threonine phosphatase family signature 304 328 IPR006186 GO:0016787
Amo10g2729 457 SMART pp2a_7 227 424 IPR006186 GO:0016787
Amo10g2729 457 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL1-RELATED 276 330 - -
Amo10g2729 457 Gene3D - 183 265 IPR036457 -
Amo10g2729 457 SUPERFAMILY PP2C-like 189 248 IPR036457 -
Amo10g2729 457 Pfam Calcineurin-like phosphoesterase 277 338 IPR004843 GO:0016787
Amo10g2729 457 Gene3D - 276 361 IPR029052 -
Amo10g2729 457 SUPERFAMILY Metallo-dependent phosphatases 276 331 IPR029052 -
Amo10g2729 457 ProSitePatterns Serine/threonine specific protein phosphatases signature. 305 310 IPR006186 GO:0016787
Amo10g2729 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 276 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2729 Amo-Chr10 91841699 91844779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2729 188 245 PP2C-type Phosphatase Gene Family AT1G47380 84.483 7.49e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2729 - - aip:110266955 205.297