Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2726 ATGCTTGGACTCTTGCATAGTACTACTCAAATTGAAACAAACACAATCGAATCTTCAACAAAAAAAAGAAACTATTATATTTTTGTGATCATGGGAAGACCACCATGTTGTGATAAAGAAGGTATCAAGAAAGGTCCTTGGACTCCTGAAGAAGACATCTTATTAGTCTCTTACATTCAAGAACATGGCCCTGGAAATTGGAAAGCTATTCCTTCTAAAACTGGTTTGTTAAGGTGCAGTAAGAGTTGTAGGCTTAGATGGACAAATTACTTAAGGCCAGGAATCAAAAGAGGTAATTTCACAAACCAAGAGGAGAATATGATCATTCACCTTCAAGCTCTACTGGGAAACAGATGGGCTGCAATAGCTTCCTACCTTCCACAAAGAACAGACAATGACATAAAAAATTATTGGAACACCTATCTGAAAAAAAGGCTCAGCAAGAAATTGGAAGAAGAAAAAAAAGATGGGTCTTGTTTGGCAAATAACAATAATGATTTTTCATCTCAGAAGGTTGTTATGCCACGTGGACAGTGGGAAAGAAGGCTCCAAACAGATATCAACATGGCAAAGAAAGCACTCACTCATGCACTCTCACCACAAAACAATAATAATAATAATATTAATATTGAATCCTTATCTTGTTCTTCTTCTTCCAATTCCAATTCTAATTCTTGTTCATCCAATAATAATAATAAAGCAACACAATCTTTAAGCTATGCTTCAAATGCTGATAACATAGCTCGGTTGCTCAAAGGGTGGATGAAGAAGAATAATAATAATGACACTGCTTCTAGCAAGGAGGGCATTTTCGGAACAAAAGTTTTTGGTAGTGAGGAGTGTTTGGAGTCTTCAAATAATACTAATTCATCATTAGAGTTTTCTCAATCAATTTATTCCCAACAAGAAGAGAGCAAGACTGAAGAAATTGGTGAAGTTTTGATGCCTTTCCATTTGCTTGAGAAATGGCTTCTAGATGAGACTAATATTGAGAAATTTATTTAA 1005 0.3512 MLGLLHSTTQIETNTIESSTKKRNYYIFVIMGRPPCCDKEGIKKGPWTPEEDILLVSYIQEHGPGNWKAIPSKTGLLRCSKSCRLRWTNYLRPGIKRGNFTNQEENMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTYLKKRLSKKLEEEKKDGSCLANNNNDFSSQKVVMPRGQWERRLQTDINMAKKALTHALSPQNNNNNNINIESLSCSSSSNSNSNSCSSNNNNKATQSLSYASNADNIARLLKGWMKKNNNNDTASSKEGIFGTKVFGSEECLESSNNTNSSLEFSQSIYSQQEESKTEEIGEVLMPFHLLEKWLLDETNIEKFI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2726 334 SMART sant 43 93 IPR001005 -
Amo10g2726 334 SMART sant 96 144 IPR001005 -
Amo10g2726 334 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
Amo10g2726 334 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 31 266 - -
Amo10g2726 334 Gene3D - 98 167 - -
Amo10g2726 334 Gene3D - 43 96 - -
Amo10g2726 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 146 IPR017930 -
Amo10g2726 334 SUPERFAMILY Homeodomain-like 41 138 IPR009057 -
Amo10g2726 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 95 IPR017930 -
Amo10g2726 334 CDD SANT 46 91 IPR001005 -
Amo10g2726 334 CDD SANT 99 142 IPR001005 -
Amo10g2726 334 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
Amo10g2726 334 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Amo10g2726 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 31 266 - -
Amo10g2726 334 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2726 Amo-Chr10 91786996 91788998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2726 31 331 MYB Transcription Factor Family AT5G62470 46.667 1.26e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo10g2726 Myb_DNA-binding 3.6e-16 CL0123