Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2722 ATGGGTTGCATCAATTCCAAGAATGCTGTGTCTGGGGACTCATCACCTTATTTATCACCTGTTGATCATGTGATTTTGGAACCTCTTCCTCCACCAGCAGTTTCAGTTGCAGGATCAAGGGGCCATTCTCATGTGGCAGGATCGTCATTAGCAGATGAGAAGAAGAAATTGAAGAAGAACGCCTCCAAGAAGAGCAATGGCTCCTTTAGCATCAGGCTTGGATTCTCCAAGAGGCATGTTGATGCTGAACACAATGCTGCTGGTTGGCCAAGTTGGCTCACAGTTACTGCTGGTGAAGCTGTTCATGGATGGCTCCCTCTTAGAGCTGATTCTTTTCAGAAGTTAGATAAGATTGGACAAGGTACTTATAGCAGCGTGTTCAGAGCACGTGAAGTTGAAACAGGAAGGATGTTTGCTCTGAAGAAGGTGCGCTTTGACAATTTACAACCTGAGAGCATTAGATTCATGGCAAGAGAAATATCGATCCTTCGCAGGCTAGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCTAAGCAATCTAGTAGCATATACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGCTTAGTATCGCGTCCTGATATTCTCTTCACTGACTCTCAGATAAAGTGTTACCTGCGACAGCTATTAAGTGGAATTGAGCACTGTCATATCCGTGGTATCATGCATCGTGACATTAAAGTATCAAACATCTTATTGAACAATGAAGGTATTCTCAAGATAGGAGATTTTGGATTAGCAAATACAATTAGTCCAAATAACAAGCATCAGTTAACCAGTCGTGTAGTAACTCTATGGTATCGCCCTCCTGAGCTCTTGATGGGATCAACCAATTATGGAGTATCGGTTGATTTGTGGAGTGTTGGTTGTGTATTTGCCGAACTTTTTCTAGGAAAACCAATCCTTAAGGGAAGAACTGAGGTTGAACAACTACACAAAATTTTTAAGCTGTGTGGATCTCCGCCGGACGATTTCTGGAAAAAGTATAAGCTTCCTCATGCAACAGTATTTAAGCCTCAAACTACTTACGAAAGCTCTTTGCGTGAGAGGTGTGCCGAGTTTCCAGAAACTGCTGTTGATCTACTTGAGACTTTATTATCCATTGACCCCGCCAATCGTGGAACCGCCTCCTCTGCCCTGATGTCTGAGTATTTCAACACCAAACCTTATGCTTGCAATCCATCAAACTTGCCAAAGTATTCGCCTAGCAAAGAACTGGATGCTAAAAGTCGGGAAGACATGTCGAGGAAAAGGACCGATGATAAAATGCAAATGCGAGATGCTGCAACATCGAGAAGGCAACCAAGACGAGTCAAGAAATATTTGCGAGAACCAATTGATCATACTCAATCAGTTTCCAAAGAGAATGGTCCTCATAATGTTCGTAGAAGTGATGGTAGATCACATATTCAAAAGGGCATAGGAGGACACAAAGACCATCTACACCCCGAAATGGATGCAGTCTCAGACCTTTCGCAGATGGTGAATATTGCAGATGGTAATGGCTTTACTGTACCGGCACAAGGCGGCTATGACTGGGTGAAAAGGAGAAAGCAAGATGCTTCATCTACACTATCAGATGGCTCAAGAAGCAAAATTAGTGCATTGGATCCAAACTTTGCTAAAGGAACTTATGATTTAAACAGACAAAGGATGACTGCTTTGGACAAGAGATATAATGACAAGCAAGGTTACCATGAAGAGACTCGCGTAACGATGGATTTTGATCCTTCCGAACTATTGAATCATCAGGGAAATACAGATCATGGTTCGCAAGTGAGTGACATGCGGCGCGAAGTTCGAAAATCAAGGTTTGGAAGAGAGATATGA 1863 0.4267 MGCINSKNAVSGDSSPYLSPVDHVILEPLPPPAVSVAGSRGHSHVAGSSLADEKKKLKKNASKKSNGSFSIRLGFSKRHVDAEHNAAGWPSWLTVTAGEAVHGWLPLRADSFQKLDKIGQGTYSSVFRAREVETGRMFALKKVRFDNLQPESIRFMAREISILRRLDHPNIMKLEGIITSKQSSSIYLVFEYMEHDLAGLVSRPDILFTDSQIKCYLRQLLSGIEHCHIRGIMHRDIKVSNILLNNEGILKIGDFGLANTISPNNKHQLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDDFWKKYKLPHATVFKPQTTYESSLRERCAEFPETAVDLLETLLSIDPANRGTASSALMSEYFNTKPYACNPSNLPKYSPSKELDAKSREDMSRKRTDDKMQMRDAATSRRQPRRVKKYLREPIDHTQSVSKENGPHNVRRSDGRSHIQKGIGGHKDHLHPEMDAVSDLSQMVNIADGNGFTVPAQGGYDWVKRRKQDASSTLSDGSRSKISALDPNFAKGTYDLNRQRMTALDKRYNDKQGYHEETRVTMDFDPSELLNHQGNTDHGSQVSDMRREVRKSRFGREI* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2722 620 PANTHER CYCLIN-DEPENDENT KINASE 1 564 - -
Amo10g2722 620 MobiDBLite consensus disorder prediction 35 65 - -
Amo10g2722 620 MobiDBLite consensus disorder prediction 415 461 - -
Amo10g2722 620 MobiDBLite consensus disorder prediction 406 479 - -
Amo10g2722 620 PANTHER CELL DIVISION PROTEIN KINASE 1 564 - -
Amo10g2722 620 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Amo10g2722 620 Gene3D Transferase(Phosphotransferase) domain 1 195 436 - -
Amo10g2722 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Amo10g2722 620 CDD STKc_CDK9_like 112 396 - -
Amo10g2722 620 Gene3D Phosphorylase Kinase; domain 1 99 194 - -
Amo10g2722 620 MobiDBLite consensus disorder prediction 589 620 - -
Amo10g2722 620 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2722 620 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2722 620 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2722 620 SUPERFAMILY Protein kinase-like (PK-like) 106 401 IPR011009 -
Amo10g2722 620 MobiDBLite consensus disorder prediction 603 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2722 Amo-Chr10 91739673 91744749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2722 104 446 Core Cell Cycle Gene Families AT5G10270 45.856 1.38e-108 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Amo10g2722 Pkinase 5.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2722 - - gmx:100790917 847.04