Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2706 ATGATGGAGAAGTTGCGGTTTGATAAGATGGTGGCAGTGGCGGTGGCTGCGGTGGTGGCGGTGACGGCAATGGTTGTGATGGGAGAAGACCTCCATAGAGTTGGAGGTTCCAAAGGATGGCGTCCTGATGTCAACTACAGTGATTGGTTTGCTCATGAGAAGACTGTTTATGTTGGTGATTGGCTTATATTCTATTTTGACAAGCGATACTACAACGTTCTGGAAGTGAACAAGACAAGTTACGAGAAATGCATAGACAGAGATTTCATTAAGAACGTGACACGTGGCGGCCGCGACGTGGTCCATTTGACGGAGCCGAGGGCCTACTACTTCCTCTCCAGCGGAGGATACTGCTTCCATCAAATGAGAGTTGCCATCAACGTTGTTGCCAAAGATGAGAGAAAAGACCAACCTGCCCCCATTCTTGCAACTGCATCCCCATCAGCACCTTCTCAATACTCTGCCTCTTCCACTATTATGTTCACATGCATTTGGATTGTTCTTGTTAATGTGGTTTATGTGAGTTTGTTTAGTGAGAATTATTAG 546 0.4634 MMEKLRFDKMVAVAVAAVVAVTAMVVMGEDLHRVGGSKGWRPDVNYSDWFAHEKTVYVGDWLIFYFDKRYYNVLEVNKTSYEKCIDRDFIKNVTRGGRDVVHLTEPRAYYFLSSGGYCFHQMRVAINVVAKDERKDQPAPILATASPSAPSQYSASSTIMFTCIWIVLVNVVYVSLFSENY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2706 181 PANTHER EARLY NODULIN-LIKE PROTEIN 20 12 168 - -
Amo10g2706 181 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Amo10g2706 181 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Amo10g2706 181 PANTHER BLUE COPPER PROTEIN 12 168 IPR039391 GO:0009055
Amo10g2706 181 Gene3D - 29 131 IPR008972 -
Amo10g2706 181 Pfam Plastocyanin-like domain 42 116 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2706 Amo-Chr10 91612428 91614882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2706 10 158 Phytocyanin Superfamily AT2G27035 43.226 6.61e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2706 - - ahf:112718354 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3381 20 142890216 142891430 Amo10g2706 10 91612428 91614882 hybridization