Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2702 ATGAAGAGGGTTCTGTTGCTTCTTGTGTTTGTTGCTTTTGCTTTCATTGTTATGGTTCCTGAAGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCCTCTAGCTATGGTGTCAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACAATGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAATGTTCTAGAGGTGAACAAGACAGACTACGAAAAATGCAATTCTGATCACCCTCTTCACAATTGGACCACCGGTGCCGGAAGAGACGTCGTTCCATTAAACGTGACTCGAAACTACTACTTCATCAGTGGCAAGGGATTCTGCTTTGGTGGCATGAAGCTAGCTGTCCATGTCGAGAACCTGCCGCCGCCACCAAAGGCTTCCCCAGAAGTAGCTGGAGCACCACCGGCGTTGTACTCGAGAAGCCAGGTTGTTCTGTTGCCCGTTGTCTTCGCCGTTGGGGCGGCATGGGACACATTCATTCATCTTTGGTAG 516 0.4748 MKRVLLLLVFVAFAFIVMVPEASAKRWLVGDNMGWSSSYGVNYTNWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYEKCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVENLPPPPKASPEVAGAPPALYSRSQVVLLPVVFAVGAAWDTFIHLW* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2702 171 PANTHER BLUE COPPER PROTEIN 5 163 IPR039391 GO:0009055
Amo10g2702 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Amo10g2702 171 Gene3D - 23 128 IPR008972 -
Amo10g2702 171 PANTHER LAMIN-LIKE PROTEIN 5 163 - -
Amo10g2702 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Amo10g2702 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2702 Amo-Chr10 91598431 91600740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2702 1 171 Phytocyanin Superfamily AT5G15350 50.575 4.02e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2702 - - mtr:MTR_6g013420 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3378 20 142843125 142846352 Amo10g2702 10 91598431 91600740 hybridization