Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2675 ATGGCAAGTTTCAAGGAACTCTCAATGGGTGGAGTAGTCTTGAATAATTCAAGAAGAAATTCATCAAAGGAAAGAAAGAAGAAAGGTGATGAAGATGATTTAGGGCTTAAAAGAAAACTCAAACTTTGGTTTGGTTGCGTGACACTGATCTTGAGATCAAAAGCAAAAGATTCTGCGACTGATCACAAATATAAATCAGATGGAATAGAGGAGAAAAGTATTGGTCCCATATCATCAACTCCAAGCAATTCACCAATTTTTCATGGGCCTGGTGGATCAAGCATCACTACTTCTATAGTAATAATTGATGAAGAAAGCGTGGTTAATCCAAAAAGTTTTACATACAAACAGTTAAAGTTGGCAACAAAAAATTTTAAGAGAGAGCATTTTCTTGGTGAGGGAGGATTTGGAAGTGTCTTCAAAGGATGGCTTAGTAGAGATGATGCTATGACTCCAACAAAACCTGGAATGGGAATCCCTGTTGCCATTAAATCCCTTAATCAATTTGGTCTTCAAGGCCATCAAGAATGGCTCGCTGAAGTAAACTATCTGAGTCAGCTAAAGCACCCAAATTTAGTGAAACTAATTGGATTTTGCAATGAAGATGATAAGATGCTGCTTGTTTATGAGTTCATGCCTCGTGGAAGCCTTGAATCCCATCTCTTTAGGAGAGCTGTGGTGTTTCCATGGTCCATCAGAGTGAGAATAATGCTTGATGCTGCAAAGGGACTTGCATATCTTCATGAGAAGACTCAGAATAAGAATGCAGAGTTCCATGCAAAGCTATCCGACTTTGGTTTCGCAAGGGATGGACCTGAGGGAGATAAAACTCACATATCAACCAGAGTCATGGGAACCCATGGCTATGCTGCCCCAGAATATGTCATGAATGGGCACTTGAGTGCGAAGAGTGATGTGTATAGTTTTGGAGTGGTGATGCTGGAGATGGTGACAGGAAGGAAGGTGATAGACAGACAAAGGGCACATAGTGAGATGAACTTGGTGAGATGGGCACTGCCCTTAATAAGGGACAATGGAAGGAACAGCCATATACTCCTCATTGACCCAAGGCTTCATGGCCATTACTCCCCAAAGGCTTCCCTTAAGGCACTTAAGTTGGCCTCTCGCTGCCTCCGCTTCAACCCTTCCATGAGACCTACCATGGATTCAGTTGTTCAATCCATCATCAACTTCCCTCAAGAAGCCTCTCCTCTTCCAATTCCTCCTCCTCCTCATCTTAATACTGACTCCAACAAGTATGGTCTTGTTTCTTCTGCTTCTGCTTCCAGGACCGACGTGCCGACTCGCTTTCAGGCTTCCCCTTGCCACCTCAACCACCACCACCAAGCTCATGTTGCTTCAACTTCATCAACTCCACCAAGGCCTAATGTTAGAATTGATCAAAGGCGTTGA 1413 0.4303 MASFKELSMGGVVLNNSRRNSSKERKKKGDEDDLGLKRKLKLWFGCVTLILRSKAKDSATDHKYKSDGIEEKSIGPISSTPSNSPIFHGPGGSSITTSIVIIDEESVVNPKSFTYKQLKLATKNFKREHFLGEGGFGSVFKGWLSRDDAMTPTKPGMGIPVAIKSLNQFGLQGHQEWLAEVNYLSQLKHPNLVKLIGFCNEDDKMLLVYEFMPRGSLESHLFRRAVVFPWSIRVRIMLDAAKGLAYLHEKTQNKNAEFHAKLSDFGFARDGPEGDKTHISTRVMGTHGYAAPEYVMNGHLSAKSDVYSFGVVMLEMVTGRKVIDRQRAHSEMNLVRWALPLIRDNGRNSHILLIDPRLHGHYSPKASLKALKLASRCLRFNPSMRPTMDSVVQSIINFPQEASPLPIPPPPHLNTDSNKYGLVSSASASRTDVPTRFQASPCHLNHHHQAHVASTSSTPPRPNVRIDQRR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2675 470 Gene3D Transferase(Phosphotransferase) domain 1 212 403 - -
Amo10g2675 470 ProSitePatterns Protein kinases ATP-binding region signature. 131 164 IPR017441 GO:0005524
Amo10g2675 470 MobiDBLite consensus disorder prediction 1 31 - -
Amo10g2675 470 SUPERFAMILY Protein kinase-like (PK-like) 107 417 IPR011009 -
Amo10g2675 470 Pfam Protein kinase domain 126 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2675 470 MobiDBLite consensus disorder prediction 446 470 - -
Amo10g2675 470 Gene3D Phosphorylase Kinase; domain 1 110 211 - -
Amo10g2675 470 PANTHER OS01G0588500 PROTEIN-RELATED 93 442 - -
Amo10g2675 470 MobiDBLite consensus disorder prediction 73 91 - -
Amo10g2675 470 MobiDBLite consensus disorder prediction 449 463 - -
Amo10g2675 470 MobiDBLite consensus disorder prediction 61 91 - -
Amo10g2675 470 ProSiteProfiles Protein kinase domain profile. 125 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2675 470 PANTHER TYROSINE KINASE FAMILY PROTEIN 93 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2675 Amo-Chr10 91047436 91052838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2675 108 395 Glycoside Hydrolase AT3G07070 46.053 7.10e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo10g2675 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2675 - - ahf:112786408 817.379