Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2662 ATGGAAATGATGACAAAGAAAGAAGAGAACATGAAGAGGAGTTGGATGTCAATGCCACAAAGTGAGTTCCAAGTAGCAGCAAGGGGTAACAAGAGGAGAAGGAGAGAGCTTACCGCAGTTGCACTAACAAATGAAGAAAACCAAAGTAAGGAACAAACATTGCAGCCACACCAACAGCAACAGAAAGTTGATCCAAATTCCACTACCAACACTACAAAGAGAAGTTCAAGATTCAGGGGTGTCAGCAGACATAGATGGACAGGTCGATACGAGGCTCACTTGTGGGACAAGCTCTCTTGGAACATAACACAAAGGAAGAAAGGGAAGCAAGTTTACCTTGGGGCATATGATGAAGAAGAATCTGCTGCTAGAGCATATGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACCAATTTTCCGATATCAGATTATGAGAAAGAGATTGAGATAATGCAAACTATGACAAAAGAAGAGTACTTGGCTACTCTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCACGGATCGGAAGAGTTTTTGGAAACAAATATCTCTACCTAGGCACCTACAGCACCCAAGAAGAAGCTGCTCGTGCTTATGACATAGCAGCCATCGAGTATAGAGGGATCCATGCTGTAACCAACTTTGATTTGAGTTCTTACATACGGTGGTTAAAGCCTTCAGGGGGGAACATCTCAGAATTAAAACAGGAATCAGAGGTAACRCCRRAGTCTCAGACAGTGGTATCTCAAACTCATTCACCAATAGAGGGGTCTAAATCCTTGGCCGTTCATACATTTAGTCCAGATTATCTCGATTTACCTCAAAATCATGAAATCTTTGAAAACAAAACATTCCAATTCTCCAGCAATAAGTCATCTTCTCCAACCGCACTCAGCCTSCTCCTCCGATCATCRATATTTAGAGAATTGGTTGAAAAGAATTTGAACATGTGTGGAGATGAAACTGATGGGGAAGACAAAAAGGATCAACGCCCACAGATAACTAGTGATGATGAGTTGGGTGGGATCTTTTACGATGGAATTAGCAATCTCCCTTATCTGTGA 1128 0.4193 MEMMTKKEENMKRSWMSMPQSEFQVAARGNKRRRRELTAVALTNEENQSKEQTLQPHQQQQKVDPNSTTNTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNITQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSSYIRWLKPSGGNISELKQESEVTPXSQTVVSQTHSPIEGSKSLAVHTFSPDYLDLPQNHEIFENKTFQFSSNKSSSPTALSLLLRSSIFRELVEKNLNMCGDETDGEDKKDQRPQITSDDELGGIFYDGISNLPYL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2662 375 MobiDBLite consensus disorder prediction 339 356 - -
Amo10g2662 375 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 3 370 - -
Amo10g2662 375 ProSiteProfiles AP2/ERF domain profile. 77 143 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 PRINTS Ethylene responsive element binding protein signature 219 239 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 CDD AP2 76 145 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 CDD AP2 178 239 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 SUPERFAMILY DNA-binding domain 76 145 IPR016177 GO:0003677
Amo10g2662 375 SMART rav1_2 77 149 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 SMART rav1_2 179 243 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 Pfam AP2 domain 178 229 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 Pfam AP2 domain 76 135 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 370 - -
Amo10g2662 375 MobiDBLite consensus disorder prediction 16 80 - -
Amo10g2662 375 MobiDBLite consensus disorder prediction 339 360 - -
Amo10g2662 375 MobiDBLite consensus disorder prediction 41 76 - -
Amo10g2662 375 ProSiteProfiles AP2/ERF domain profile. 179 237 IPR001471 GO:0003700|GO:0006355
Amo10g2662 375 SUPERFAMILY DNA-binding domain 178 239 IPR016177 GO:0003677
Amo10g2662 375 Gene3D AP2/ERF domain 178 239 IPR036955 GO:0003700|GO:0006355
Amo10g2662 375 Gene3D AP2/ERF domain 76 145 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2662 Amo-Chr10 90803857 90806116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2662 73 241 AP2-EREBP Transcription Factor Family AT5G57390 71.006 3.94e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Amo10g2662 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2662 - - ahf:112716370 744.191