Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2651 ATGGAGAAAAAAAGGGTTGAGGTAGAACAAGAATCTCTTACTTCATTAAGCGGCAGCTATAAGGATTTTATTAAGGATTTTATTTCAATCTATGAACTCACCTTCACAGCTAGATGTACAAATGTGAAGTGTAATGTTCGAAAGCACGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTCACTACATATGAGAGAAAGCACAATCACGAGATGCCAATTAAGAACATAACCCAAATATCCCCTCTGAGAGAGATTCACAAGCTTCTCTTAGTAAAGACAAACCATGATTTTAACACGACAATCAAGTTTAACAATAACACACTACTATGA 333 0.3604 MEKKRVEVEQESLTSLSGSYKDFIKDFISIYELTFTARCTNVKCNVRKHVERAIDDPRAFVTTYERKHNHEMPIKNITQISPLREIHKLLLVKTNHDFNTTIKFNNNTLL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2651 110 SUPERFAMILY WRKY DNA-binding domain 38 73 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g2651 110 ProSiteProfiles WRKY domain profile. 38 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g2651 110 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 80 - -
Amo10g2651 110 Pfam WRKY DNA -binding domain 38 71 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g2651 110 Gene3D WRKY domain 2 74 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g2651 110 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 80 IPR044810 GO:0003700
Amo10g2651 110 SMART WRKY_cls 38 72 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2651 Amo-Chr10 90322913 90324912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2651 38 72 WRKY Transcription Factor Family AT2G37260 71.429 4.61e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo10g2651 WRKY 7.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2651 - - mnt:21387383 95.1301