Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2645 GCGGCAGCGCAGCACATTTTAAAGGCGTTGGCGGCAAGCAAGGCTGTCTCCGATGATCTGAGAAAAACTCTCTTGGATTTCGATATTCACCTATCAGCCATGTCCATAGTTGAAAGGAGCATCAAGCAGCTAGAAAGGAAAATTAAATTTGCCGAAGGCAAAATAATGACTTGGAAAGCGAAGAATTCGATGATATGGGACTGCGGTTCCAAGGAATCTTCCGAGTATTTAGAAGCCCACAAGCAATACCTTGAACCGGAATCTTTCGCGAACGAGGCCGGTTCAGTTGATCTGGTTAATCCTGCGTTAATTCCAGATCTCAAGAGCATTGCAAATGTCATGTTCGGTTCCAAGTACCATCAGGAGTTTTGCCAGACTTTCATTTCTTCGAGACGCGACGCCTTGGACGAGTTCTTCGTGGTTCTTGAAATAGAAAGATTCAGCAACGAGAACGTCATGAAAATGGAAGGGAATTGCTTGAATCGCGAGATAAAGAAGTGGATTCGCGCCGTGAAGATAGTCTTTCAGGTGTATCTCGTCGCAGAGAAACGGTTGTGTAAGCAAATTCTTGGAGACTTCAACGACTCTGTTTATCAGTTCTGCTTCGCCGAGATAACTTTGAGTTTCGTGTTGAAACTTTTGAATTTTGGTGAGGCCGTAGCAATGGGAAACCGTTCACCGGAGAAACTGTTCTGTTTTCTAGACATCTATGAAGTTTTGGAGAATCTCGCTGTCTATGTAGACATTTTGTTCTTTGAAGAATTTGGTTCATTTGTAAGAGATGAGTTTCACAAGCTTCTAAACAAGTTTGGTGAAGCTTCAAAGTTCACATTCTTAGCATTTAAAAGTGCTATTGCAAATGATCCTTCAAAGGCGCGATTCCCTGGTGGCGGAGTTCACCATCTTACCAAATATGTAATGAATTTCATCAAGACACTGGCGGAATATGGCGAGGCACTCAACCTTCTCCTGGCGGACGAGACTCCGGCCGACCCAGAAGGCAATGATGACGATGACAGCCATCCTTTGGCTGGCGAATTCTGGTCGGTGGCGGCCACTCTTGAATCCAACCTGATCAGTAAGTCCAAATTGTACAAAGATGTGGCATTGCAACATGTATTCATGATGAATAACATTCACTACATGGTCCAAAAGGCTAAGTCCTCGGAACTAAGCTTAGTGTTCGGCGATCGATGGCTTCGTCGGCACGTTGCCAAGTTCCGAGATAATGCTAGAAGCTATGAGAGGGTAACTTGGGGTCCAATACTCTCTATTCTGAAACAAGAAAACGCTGAATTGAATTGCACTTCTTCGAAGGAAAATCTAAAGAAAAAGTGCAAAGATTTCAATGCTTCTTTTAGTGAAACCTATAGGTCACAAACAGGGTGGTATATTCCAGATACTGAACTCCGTGAAGATGTACAAATCTCAATTTCTCAGAAAGTTGTTCATGCTTACCGGCAATTCACTGGGAGATATTCATCAACCATTGATGAGAAGTGGAAAAAGCACACTGTGGATGATATAGAGAACTATGTATTGGACCTTTTTGTAGGTTCACCAAAATCTTTGCATTATTTTTCATCATCAGCACAGATACTGAAAAGGGATAAGAGTGTTTGA 1623 0.4276 AAAQHILKALAASKAVSDDLRKTLLDFDIHLSAMSIVERSIKQLERKIKFAEGKIMTWKAKNSMIWDCGSKESSEYLEAHKQYLEPESFANEAGSVDLVNPALIPDLKSIANVMFGSKYHQEFCQTFISSRRDALDEFFVVLEIERFSNENVMKMEGNCLNREIKKWIRAVKIVFQVYLVAEKRLCKQILGDFNDSVYQFCFAEITLSFVLKLLNFGEAVAMGNRSPEKLFCFLDIYEVLENLAVYVDILFFEEFGSFVRDEFHKLLNKFGEASKFTFLAFKSAIANDPSKARFPGGGVHHLTKYVMNFIKTLAEYGEALNLLLADETPADPEGNDDDDSHPLAGEFWSVAATLESNLISKSKLYKDVALQHVFMMNNIHYMVQKAKSSELSLVFGDRWLRRHVAKFRDNARSYERVTWGPILSILKQENAELNCTSSKENLKKKCKDFNASFSETYRSQTGWYIPDTELREDVQISISQKVVHAYRQFTGRYSSTIDEKWKKHTVDDIENYVLDLFVGSPKSLHYFSSSAQILKRDKSV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2645 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 80 IPR004140 GO:0000145|GO:0006887
Amo10g2645 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 92 525 IPR004140 GO:0000145|GO:0006887
Amo10g2645 540 SUPERFAMILY Cullin repeat-like 74 517 IPR016159 -
Amo10g2645 540 Gene3D Exocyst complex component Exo70 13 525 - -
Amo10g2645 540 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 10 80 - -
Amo10g2645 540 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 92 525 - -
Amo10g2645 540 Coils Coil 34 61 - -
Amo10g2645 540 Pfam Exo70 exocyst complex subunit 165 514 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2645 Amo-Chr10 90224407 90226167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2645 97 517 EXO70 exocyst subunit family AT5G61010 47.307 4.59e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2645 K07195 - gmx:100791622 607.446