Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2575 ATGATGATGGAAACAAAGGAAGAAGGCATGATAATAGAAGAGAACAAGAAGAAGAGCAATGAAAATGACAAGTTTACCCTGAAAGGATCGGCGGCGGCGTCGTCATCAACAAGGCAATGGTCGGCGTTTCGGAATCCAAGAATCGTGAGGGTATCAAGGTCATTTGGGGGAAAAGACAGGCACAGCAAGGTTTGCACCATAAGAGGGCTTCGTGACCGTCGGATCAGGCTCTCAGTCCCCACCGCCATTCAATTGTACGACTTGCAAGACAAGTTGGGACTCTCTCAACCAAGCAAAGTCATCGATTGGCTTCTTGATGCTACAAAGCTTGATATCGATAAGCTTCCCCCTCTTCACTTCCCTCAGCCCTGCTTCCAACCGCCGCAAACCCTATTCCCTCATCTTCTCCATGACCCTTCCTCTTTCTGGAAACCCAGGTTCTGGGAATTGGACTCTTCCGCTTCCTCCTCTTCTTCTTCCAGGTTTCTCAAAGGGAAGGACTTGATGACCACCATGCCTTCCGATAATAATAACAATAAAGCCAAGTGGATCTTCAAATCAAACAATGCAGATCATGAGAATCAAGAATTTGGAGGCGGTTACACTACTCAGAGACTTTTCCCAATGGAGACTCAGACTACTACTAATAATAATCCTTTTCAGATGGGAGATTACTATGGCAGTTATCCAATGATGAATAACGGGGGTTTGATGCAATTGAACCATTTATCTTCTTTGCAAGTAGGCCCATCTGGTTCCTCACAATTA 768 0.4544 MMMETKEEGMIIEENKKKSNENDKFTLKGSAAASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLDATKLDIDKLPPLHFPQPCFQPPQTLFPHLLHDPSSFWKPRFWELDSSASSSSSSRFLKGKDLMTTMPSDNNNNKAKWIFKSNNADHENQEFGGGYTTQRLFPMETQTTTNNNPFQMGDYYGSYPMMNNGGLMQLNHLSSLQVGPSGSSQL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2575 256 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 216 IPR005333 GO:0003700
Amo10g2575 256 Pfam TCP family transcription factor 57 140 IPR017887 -
Amo10g2575 256 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
Amo10g2575 256 PANTHER TRANSCRIPTION FACTOR TCP17 2 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2575 Amo-Chr10 88670749 88671651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2575 41 209 TCP Transcription Factor Family AT5G60970 52.717 2.13e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo10g2575 TCP 6.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2575 - - aip:107621125 490.345