Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2574 ATGTTCTTGCGCCTCGCCATAAGAGGATTTCTGCTGGTATATCAATATTGGAACATGGAACTTGCTCAATTTTTACTCTCATTTTGTCTAGTTGTGTTTGTTGAATTTCTTTTCCTCATATTGAAGTATCTGCAGCTAGTAGAATTTTCTGTACAATTTTGTGAATGTTTACATCACATCAATGATGCATCTAATGCTTCTGCTTTTCGTATAGGCAATCCTCACTTCGGTGATGGCAGCTTGGAAACAGATTCGAATAACATGCTCCATCAACAAACAACAATGGATATGAACCTCAACAAGGGTGTGAATGAAAAACAGAGAACCTCGACTGAATCGTCAAGACCATCCTTCTCTTCTTGTTCATCATCACTATCCTCTTTGGATTGTAAGGCCGAAGCTGAAGCTACTTTCGACGGGATTGTTTTTCCCGAAACTCTTTCAAGGGATGTAGTTATGAACGAAATAGCTATCTCTTCCCATTTAGCACGTCACACACTTGACCTTAGGGATGTAGTGAAGGATTCAATGTATAGGGAGCCCCGAGGGCTGTCGGTTAAGACTACTGCCAAAGAGGAAGCTGTCTTTCATACTATGAAGCACAAGGATTCTCCGCGACCTTTTCATCCGTTGAAAGCTGTTGATGGGTCTTATGGAGTTGGAATAGATGGGAAACAAAGTGTGCCTGTTGATCTAAATGATTCCATGCGAGTGCTTGCTAAACTTAGAGAGGCACCTTGGTATTATGGAGAAACCAGAGAACATCTGAGACCGTCGCATGAAGTGAAAGACGGAAAATGGCATTCAATCTCAAAGGATTCCCCTCGGTTTGCTTATGACAGAAGGGAAACTAGCCGTTTTTCTTTTGAATCCCACGACACTATCAAATCGACACCAAAGATAAGAGAATTTCCGAGACATTCACTAGATAGTAGGGAAGGCACGTGGCGCGGTCACAATGCCGAATCAAAACCAAGTCACCACTCAAGCAAAGCTTACAGCAGCACCTCCACCTCAAATAACAAAGTTTCTAGCCCGCAACAGTCTTCGACTATCCAGAGCCGGCCTCCGAGTGTTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCGGATTCTGCTTTGGCCAGTTATACTCAATCAAGTCCAGGTGAGACTTACACAGCTCAAGATAATGGTCAGTTTCCAATATCATCAAGAGATGGATTCACCCGGCCACTCCGAGTTTCTAGTTCCCCGAAAATCTCATTGAAAGACCCAACATCCCCTCGGCGGAAGAATGCTGATCTGGTTATGAAACCCATCTCAAGTGCTAGAGTTCCCATTGAGCCTGCACCATGGAAGCAGCAGGATGGAAATAGAAGCTCTCAGAAAACAAGTTCAACAGCAACAAAAGCTCCCGCAAGAACACCGGATTCATTTACCTCGGTTTATAGTGACATTGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTAGAAGCAATGCAAGAAAAGGGACTATTAGACAACAAAAAAGAAGAGCAAGCTCCAAATGTTGCTCGAAATCAAAGAGACTATGAACCAAAAGTTATCAATTTAATCGAGAATTCTACATCGGCAAGGCATCAAAATCCCCAAGGAAACAATGCTCTGTCGTCTACAATCAAGGGATATGACTCGGCAAGAGCGTTTGAATCCCCGATAGTGATCATGAAACCTGCGAAACTTGTTGAGAAAACCAGGATTTCTGCTTCTTCAGTCACACCAATTGGTTCCCAGAAACTCCAGAGCAGTGGTGCATATGTAAATAAAAATGCTCTGTCTTCAACCGGGGAAGTGAAAGATCAGCCTTCTAACACTAGTCACTGCAACCGTGATGCTTCTACGAGTGCCATCGATAAGAAAGCAAGAAATGGGAAGACTATGAAACAAGCACAAACACAAACAAGGTCTCAACAATTTCCAAGAGAGAATAGCCCGAGTTCGGTAAAGCACTCCAGATCTGTAAGCCCAAGAATGCAACAGAAGAAGTTGGAGTTAGATAAGAGAGCTCGTCCGCCTGCGCCACCAGTGGACTCAAACAAACCAAGAAGGTTAACTGGTAAGAAGACGGCAGAATTAGGTCCCCCGGCCGGAAAAATAAGGCCAAAAGGCCGCAACTCACGGCCTGGTGACGAGCAAATGAGCGAGGCAAGCACTGAATCAAGAAGCTTAAGTTGCCAAGGGGACGATGTTTCTCTGAAGTCCGATGGTATCACCGTCGATTCAAAGACGGATATTGAATTCACCAGCAGTCTAAGATCTGCTGAAATTGAAGATGGCCAGAGCCCATCCTTGAAGGCTATGAAGCAATTGGTTTCACAAACAGTGCAAAAATCATCTGAGAGGTTGGATCAGGATGAGACAGTTGCTGAACTTGCAACCGTTGCCCCGGAGAATCCAAGTCCTATGTCATCTCCAGGAAAGAAGATACCGGAAGAGCGAAAAGCAGATAATGAGAATCAAGATCTGTGGAACGCTGCGGATAGCCTTTCTTTTAACAGCTCCGGTGAGATGAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCAGAAGCTCAGACGGCTAAACTCTAGTCACGACGAAGCTAGAATCGATTACATTGCTTCGCTATGCGAAAACACAAATCCGGACCACAGATACGTATCTGAAATACTGTTGGCCTCAGGTCTCCTACTCAGAGATCTGAGTTCTGAATTGTTGACATTTCAACTGCACACGTCTGGTCATCCGATTAACCCGGAGCTTTTCCTTGTACTGGAGCAGACGAAAGCGAGTAGTTTGCTTGCGAAAGAAGAAAGCACTGGAAAAGTTGCCTACCCGAAGCTAAATGCCGAGAAGTTTCACCGGAAACTCATCTTCGATGCTGTGAACGAGATCCTCGGTGTGAAACTAGGCTCCTCTACTGAGCTATGGTTTCAGCCCAGCACAGTCAATCTCGCGAAGAAAACCGTTGGCGCGCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAGAAAATGCAAGCCAAGAATCATGATTGCAGTTTAGAAGAGGAGGATAGTCTGAAAAGCATGCTAATGGAAGATGTCATGCATGGTTCTGAGAGCTGGACCGAATTCAACCGCGATTTACCCGGGGTTGTGTTGGATGTTGAGAGACTGATATTCAAGGACTTGGTCGACGAGGTTGTGATCGGCGAATCGGTTGGCTTGCGAGTCAAGTCATCGGTGCGGCGGCGGAGGCAGTTTAGGAAGTAG 3294 0.4481 MFLRLAIRGFLLVYQYWNMELAQFLLSFCLVVFVEFLFLILKYLQLVEFSVQFCECLHHINDASNASAFRIGNPHFGDGSLETDSNNMLHQQTTMDMNLNKGVNEKQRTSTESSRPSFSSCSSSLSSLDCKAEAEATFDGIVFPETLSRDVVMNEIAISSHLARHTLDLRDVVKDSMYREPRGLSVKTTAKEEAVFHTMKHKDSPRPFHPLKAVDGSYGVGIDGKQSVPVDLNDSMRVLAKLREAPWYYGETREHLRPSHEVKDGKWHSISKDSPRFAYDRRETSRFSFESHDTIKSTPKIREFPRHSLDSREGTWRGHNAESKPSHHSSKAYSSTSTSNNKVSSPQQSSTIQSRPPSVVAKLMGLEALPDSALASYTQSSPGETYTAQDNGQFPISSRDGFTRPLRVSSSPKISLKDPTSPRRKNADLVMKPISSARVPIEPAPWKQQDGNRSSQKTSSTATKAPARTPDSFTSVYSDIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLDNKKEEQAPNVARNQRDYEPKVINLIENSTSARHQNPQGNNALSSTIKGYDSARAFESPIVIMKPAKLVEKTRISASSVTPIGSQKLQSSGAYVNKNALSSTGEVKDQPSNTSHCNRDASTSAIDKKARNGKTMKQAQTQTRSQQFPRENSPSSVKHSRSVSPRMQQKKLELDKRARPPAPPVDSNKPRRLTGKKTAELGPPAGKIRPKGRNSRPGDEQMSEASTESRSLSCQGDDVSLKSDGITVDSKTDIEFTSSLRSAEIEDGQSPSLKAMKQLVSQTVQKSSERLDQDETVAELATVAPENPSPMSSPGKKIPEERKADNENQDLWNAADSLSFNSSGEMNRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYVSEILLASGLLLRDLSSELLTFQLHTSGHPINPELFLVLEQTKASSLLAKEESTGKVAYPKLNAEKFHRKLIFDAVNEILGVKLGSSTELWFQPSTVNLAKKTVGAQKLLKELCFEIEKMQAKNHDCSLEEEDSLKSMLMEDVMHGSESWTEFNRDLPGVVLDVERLIFKDLVDEVVIGESVGLRVKSSVRRRRQFRK* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2574 1097 Pfam Domain of unknown function (DUF4378) 896 1074 IPR025486 -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 103 123 - -
Amo10g2574 1097 PANTHER LONGIFOLIA PROTEIN 63 1094 - -
Amo10g2574 1097 Pfam DUF761-associated sequence motif 344 372 IPR032795 -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 327 356 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 676 692 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 448 474 - -
Amo10g2574 1097 PANTHER LONGIFOLIA PROTEIN 63 1094 IPR033334 GO:0051513
Amo10g2574 1097 MobiDBLite consensus disorder prediction 288 356 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 645 673 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 815 834 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 376 474 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 288 326 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 729 759 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 613 631 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 613 759 - -
Amo10g2574 1097 MobiDBLite consensus disorder prediction 376 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2574 Amo-Chr10 88648762 88653180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2574 153 1091 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.639 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2574 - - gmx:100805643 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4092 01 115672190 115677379 Amo10g2574 10 88648762 88653180 PCT
Amo10g2574 10 88648762 88653180 Amo01g4092 01 115672190 115677379 PCT